Knockout Mouse Phenotyping Program (KOMP2)
Knockout Mouse Phenotyping Program (KOMP2)
Program Publications
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The search results on this publication page are automated on a monthly schedule based on acknowledgement of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
| Title | Authors | Journal | PubMedID | Publication Date |
|---|---|---|---|---|
| Rederivation of transgenic mice from iPS cells derived from frozen tissue. | Lee, Angus Yiu-Fai; Lloyd, K C Kent | Transgenic research. | 20397045 | 2011 Feb; |
| Optical Coherence Tomography for live imaging of mammalian development. | Larina IV, Larin KV, Justice MJ, Dickinson ME. | Curr Opin Genet Dev | 21962442 | 2011 Oct |
| A knockout mouse resource for the biomedical research community. | Lloyd KC. | Ann N Y Acad Sci | 22211970 | 2011 Dec |
| Mutant mice derived by ICSI of evaporatively dried spermatozoa exhibit expected phenotype. | Li, Ming-Wen; Baridon, Brian; Trainor, Amanda; Djan, Esi; Koehne, Amanda; Griffey, Stephen M; Biggers, John D; Toner, Mehmet; Lloyd, K C Kent | Reproduction (Cambridge, England). | 22274886 | 2012 Apr; |
| The role of sphingosine-1-phosphate transporter Spns2 in immune system function. | Nijnik A, Clare S, Hale C, Chen J, Raisen C, Mottram L, Lucas M, Estabel J, Ryder E, Adissu H; Sanger Mouse Genetics Project, Adams NC, Ramirez-Solis R, White JK, Steel KP, Dougan G, Hancock RE. | J Immunol | 22664872 | 2012 Jul 1 |
| Neuroanatomical phenotyping of the mouse brain with three-dimensional autofluorescence imaging. | Gleave, Jacqueline A; Wong, Michael D; Dazai, Jun; Altaf, Maliha; Henkelman, R Mark; Lerch, Jason P; Nieman, Brian J | Physiological genomics. | 22718750 | 2012 Aug 1; |
| Sphingosine-1-phosphate lyase expression in embryonic and adult murine tissues. | Borowsky, Alexander D; Bandhuvula, Padmavathi; Kumar, Ashok; Yoshinaga, Yuko; Nefedov, Mikhail; Fong, Loren G; Zhang, Meng; Baridon, Brian; Dillard, Lisa; de Jong, Pieter; Young, Stephen G; West, David B; Saba, Julie D | Journal of lipid research | 22781001 | 2012 Sep |
| A novel 3D mouse embryo atlas based on micro-CT. | Wong, Michael D; Dorr, Adrienne E; Walls, Johnathon R; Lerch, Jason P; Henkelman, R Mark | Development (Cambridge, England). | 22872090 | 2012 Sep; |
| Beyond knockouts: cre resources for conditional mutagenesis. | Murray SA, Eppig JT, Smedley D, Simpson EM, Rosenthal N. | Mamm Genome | 22926223 | 2012 Oct |
| The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping. | Brown SD, Moore MW. | Mamm Genome | 22940749 | 2012 Oct |
| Centralized mouse repositories. | Donahue, Leah Rae; Hrabe de Angelis, Martin; Hagn, Michael; Franklin, Craig; Lloyd, K C Kent; Magnuson, Terry; McKerlie, Colin; Nakagata, Naomi; Obata, Yuichi; Read, Stuart; Wurst, Wolfgang; Horlein, Andreas; Davisson, Muriel T | Mammalian genome : official journal of the International Mammalian Genome Society | 22945696 | 2012 Oct |
| The Mammalian Phenotype Ontology as a unifying standard for experimental and high-throughput phenotyping data. | Smith CL, Eppig JT. | Mamm Genome | 22961259 | 2012 Oct |
| The mammalian gene function resource: the international knockout mouse consortium. | Bradley A, Anastassiadis K, Ayadi A, Battey JF, Bell C, Birling MC, Bottomley J, Brown SD, Bürger A, Bult CJ, Bushell W, Collins FS, Desaintes C, Doe B, Economides A, Eppig JT, Finnell RH, Fletcher C, Fray M, Frendewey D, Friedel RH, Grosveld FG, et al. | Mamm Genome | 22968824 | 2012 Oct |
| Accessing data from the International Mouse Phenotyping Consortium: state of the art and future plans. | Mallon AM, Iyer V, Melvin D, Morgan H, Parkinson H, Brown SD, Flicek P, Skarnes WC. | Mamm Genome | 22991088 | 2012 Oct |
| Genetically Engineered Mice by Pronuclear DNA microinjection. | Demayo, Janet L; Wang, Jie; Liang, Dongcai; Zhang, Ruina; Demayo, Francesco J | Current protocols in mouse biology | 23024927 | 2012 Sep 1 |
| Immunohistochemical analysis of sphingosine phosphate lyase expression during murine development. | Newbigging, Susan; Zhang, Meng; Saba, Julie D | Gene expression patterns : GEP. | 23041657 | 2013 Jan-Feb; |
| Structural and functional concepts in current mouse phenotyping and archiving facilities. | Kollmus, Heike; Post, Rainer; Brielmeier, Markus; Fernandez, Julia; Fuchs, Helmut; McKerlie, Colin; Montoliu, Lluis; Otaegui, Pedro J; Rebelo, Manuel; Riedesel, Hermann; Ruberte, Jesus; Sedlacek, Radislav; de Angelis, Martin Hrabe; Schughart, Klaus | Journal of the American Association for Laboratory Animal Science : JAALAS | 23043807 | 2012 Jul |
| Preclinical research in Rett syndrome: setting the foundation for translational success. | Katz, David M; Berger-Sweeney, Joanne E; Eubanks, James H; Justice, Monica J; Neul, Jeffrey L; Pozzo-Miller, Lucas; Blue, Mary E; Christian, Diana; Crawley, Jacqueline N; Giustetto, Maurizio; Guy, Jacky; Howell, C James; Kron, Miriam; Nelson, Sacha B; Samaco, Rodney C; Schaevitz, Laura R; St Hillaire-Clarke, Coryse; Young, Juan L; Zoghbi, Huda Y; Mamounas, Laura A | Disease models & mechanisms | 23115203 | 2012 Nov |
| Zic3 is required in the extra-cardiac perinodal region of the lateral plate mesoderm for left-right patterning and heart development. | Jiang, Zhengxin; Zhu, Lirong; Hu, Lingyun; Slesnick, Timothy C; Pautler, Robia G; Justice, Monica J; Belmont, John W | Human molecular genetics | 23184148 | 2013 Mar 1 |
| Accessing and mining data from large-scale mouse phenotyping projects. | Morgan, Hugh; Simon, Michelle; Mallon, Ann-Marie | International review of neurobiology | 23195311 | 2012 |
| Robust and sensitive analysis of mouse knockout phenotypes. | Karp, Natasha A; Melvin, David; Sanger Mouse Genetics Project; Mott, Richard F | PloS one | 23300663 | 2012 |
| Safety, efficacy and efficiency of laser-assisted IVF in subfertile mutant mouse strains. | Li, Ming-Wen; Kinchen, Kristy L; Vallelunga, Jadine M; Young, Diana L; Wright, Kaleb D K; Gorano, Lisa N; Wasson, Katherine; Lloyd, K C Kent | Reproduction (Cambridge, England) | 23315689 | 2013 Mar |
| High osmolality vitrification: a new method for the simple and temperature-permissive cryopreservation of mouse embryos. | Mochida, Keiji; Hasegawa, Ayumi; Li, Ming-Wen; Fray, Martin D; Kito, Seiji; Vallelunga, Jadine M; Lloyd, K C Kent; Yoshiki, Atsushi; Obata, Yuichi; Ogura, Atsuo | PloS one. | 23341870 | 2013; |
| 3D imaging, registration, and analysis of the early mouse embryonic vasculature. | Anderson, Gregory A; Wong, Michael D; Yang, Jian; Henkelman, R Mark | Developmental dynamics : an official publication of the American Association of Anatomists. | 23417982 | 2013 May; |
| Bloomsbury report on mouse embryo phenotyping: recommendations from the IMPC workshop on embryonic lethal screening. | Adams, David; Baldock, Richard; Bhattacharya, Shoumo; Copp, Andrew J; Dickinson, Mary; Greene, Nicholas D E; Henkelman, Mark; Justice, Monica; Mohun, Timothy; Murray, Stephen A; Pauws, Erwin; Raess, Michael; Rossant, Janet; Weaver, Tom; West, David | Disease models & mechanisms | 23519032 | 2013 May |
| Effect of different cryoprotectant agents on spermatogenesis efficiency in cryopreserved and grafted neonatal mouse testicular tissue. | Yildiz, Cengiz; Mullen, Brendan; Jarvi, Keith; McKerlie, Colin; Lo, Kirk C | Cryobiology | 23721968 | 2013 Aug |
| Mapping registration sensitivity in MR mouse brain images. | van Eede, Matthijs C; Scholz, Jan; Chakravarty, M Mallar; Henkelman, R Mark; Lerch, Jason P | NeuroImage. | 23756204 | 2013 Nov 15; |
| Bloomsbury report on mouse embryo phenotyping: recommendations from the IMPC workshop on embryonic lethal screening. | Adams, David; Baldock, Richard; Bhattacharya, Shoumo; Copp, Andrew J; Dickinson, Mary; Greene, Nicholas D E; Henkelman, Mark; Justice, Monica; Mohun, Timothy; Murray, Stephen A; Pauws, Erwin; Raess, Michael; Rossant, Janet; Weaver, Tom; West, David | Disease models & mechanisms | 23828646 | 2013 Jul-Aug |
| The perfect host: a mouse host embryo facilitating more efficient germ line transmission of genetically modified embryonic stem cells. | Taft, Robert A; Low, Benjamin E; Byers, Shannon L; Murray, Stephen A; Kutny, Peter; Wiles, Michael V | PloS one. | 23844102 | 2013; |
| Combining sperm plug genotyping and coat color chimerism predicts germline transmission. | Lee, Angus Yiu-Fai; Evans, Kristin; Willis, Brandon; Lloyd, K C Kent | Transgenic research | 23860911 | 2013 Jul 17 |
| Design and implementation of a custom built optical projection tomography system. | Wong, Michael D; Dazai, Jun; Walls, Johnathon R; Gale, Nicholas W; Henkelman, R Mark | PloS one. | 24023880 | 2013; |
| The mouse pathology ontology, MPATH; structure and applications. | Schofield, Paul N; Sundberg, John P; Sundberg, Beth A; McKerlie, Colin; Gkoutos, Georgios V | Journal of biomedical semantics | 24033988 | 2013 |
| A mouse model for inducible overexpression of Prdm14 results in rapid-onset and highly penetrant T-cell acute lymphoblastic leukemia (T-ALL). | Carofino, Brandi L; Ayanga, Bernard; Justice, Monica J | Disease models & mechanisms | 24046360 | 2013 Nov |
| Sestrin-2, a repressor of PDGFR* signalling, promotes cigarette-smoke-induced pulmonary emphysema in mice and is upregulated in individuals with COPD. | Heidler, Juliana; Fysikopoulos, Athanasios; Wempe, Frank; Seimetz, Michael; Bangsow, Thorsten; Tomasovic, Ana; Veit, Florian; Scheibe, Susan; Pichl, Alexandra; Weisel, Friederike; Lloyd, K C Kent; Jaksch, Peter; Klepetko, Walter; Weissmann, Norbert; von M | Disease models & mechanisms | 24046361 | 2013 Nov |
| The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. | Koscielny, Gautier; Yaikhom, Gagarine; Iyer, Vivek; Meehan, Terrence F; Morgan, Hugh; Atienza-Herrero, Julian; Blake, Andrew; Chen, Chao-Kung; Easty, Richard; Di Fenza, Armida; Fiegel, Tanja; Grifiths, Mark; Horne, Alan; Karp, Natasha A; Kurbatova, Natalj | Nucleic acids research | 24194600 | 2014 Jan |
| Rapid conversion of EUCOMM/KOMP-CSD alleles in mouse embryos using a cell-permeable Cre recombinase. | Ryder, Edward; Doe, Brendan; Gleeson, Diane; Houghton, Richard; Dalvi, Priya; Grau, Evelyn; Habib, Bishoy; Miklejewska, Evelina; Newman, Stuart; Sethi, Debarati; Sinclair, Caroline; Vyas, Sapna; Wardle-Jones, Hannah; Sanger Mouse Genetics Project; Bottoml | Transgenic research | 24197666 | 2014 Feb |
| Investigations of motility and fertilization potential in thawed cryopreserved mouse sperm from cold-stored epididymides. | Takeo, Toru; Fukumoto, Kiyoko; Kondo, Tomoko; Haruguchi, Yukie; Takeshita, Yumi; Nakamuta, Yuko; Tsuchiyama, Shuuji; Yoshimoto, Hidetaka; Shimizu, Norihiko; Li, Ming-Wen; Kinchen, Kristy; Vallelunga, Jadine; Lloyd, K C Kent; Nakagata, Naomi | Cryobiology | 24201107 | 2014 Feb |
| Structural stabilization of tissue for embryo phenotyping using micro-CT with iodine staining. | Wong, Michael D; Spring, Shoshana; Henkelman, R Mark | PloS one. | 24386367 | 2013; |
| Special section guest editorial: Optical coherence tomography and interferometry: advanced engineering and biomedical applications. | Larin, Kirill V; Tuchin, Valery V; Vitkin, Alex | Journal of biomedical optics | 24570205 | 2014 |
| Linking tissues to phenotypes using gene expression profiles. | Oellrich, Anika; Sanger Mouse Genetics Project; Smedley, Damian | Database : the journal of biological databases and curation | 24634472 | 2014 |
| Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. | Adissu, Hibret A; Estabel, Jeanne; Sunter, David; Tuck, Elizabeth; Hooks, Yvette; Carragher, Damian M; Clarke, Kay; Karp, Natasha A; Sanger Mouse Genetics Project; Newbigging, Susan; Jones, Nora; Morikawa, Lily; White, Jacqueline K; McKerlie, Colin | Disease models & mechanisms | 24652767 | 2014 May |
| Animal models: Mouse already being charted gene by gene. | Brown, Steve | Nature. | 24740057 | 2014 Apr 17; |
| Automated pipeline for anatomical phenotyping of mouse embryos using micro-CT. | Wong, Michael D; Maezawa, Yoshiro; Lerch, Jason P; Henkelman, R Mark | Development (Cambridge, England) | 24850858 | 2014 Jun |
| IVF recovery of mutant mouse lines using sperm cryopreserved with mtg in cryovials. | Li, Ming-Wen; Vallelunga, Jadine M; Kinchen, Kristy L; Rink, Karina L; Zarrabi, Jasmin; Shamamian, Armen O; Lloyd, K C Kent | Cryo letters | 24869647 | 2014 Mar-Apr |
| Using association rule mining to determine promising secondary phenotyping hypotheses. | Oellrich, Anika; Jacobsen, Julius; Papatheodorou, Irene; Sanger Mouse Genetics Project; Smedley, Damian | Bioinformatics (Oxford, England) | 24932005 | 2014 Jun 15 |
| Meiosis-specific cohesin component, Stag3 is essential for maintaining centromere chromatid cohesion, and required for DNA repair and synapsis between homologous chromosomes. | Hopkins, Jessica; Hwang, Grace; Jacob, Justin; Sapp, Nicklas; Bedigian, Rick; Oka, Kazuhiro; Overbeek, Paul; Murray, Steve; Jordan, Philip W | PLoS genetics. | 24992337 | 2014 Jul; |
| Rescue of germline transmission from chimeras by IVF after sperm analysis. | Li, Ming-Wen; Willis, Brandon J; Evans, Kristin D; Araiza, Renee S; Lee, Angus Yiu-Fai; Lloyd, K C Kent | Transgenic research. | 25080098 | 2015 Feb; |
| Disruption of the potassium channel regulatory subunit KCNE2 causes iron-deficient anemia. | Salsbury, Grace; Cambridge, Emma L; McIntyre, Zoe; Arends, Mark J; Karp, Natasha A; Isherwood, Christopher; Shannon, Carl; Hooks, Yvette; Sanger Mouse Genetics Project; Ramirez-Solis, Ramiro; Adams, David J; White, Jacqueline K; Speak, Anneliese O | Experimental hematology. | 25127743 | 2014 Dec; |
| Conditional targeting of Ispd using paired Cas9 nickase and a single DNA template in mice. | Lee, Angus Yiu-Fai; Lloyd, Kevin C Kent | FEBS open bio. | 25161872 | 2014; |
| Vascular development and hemodynamic force in the mouse yolk sac. | Garcia, Monica D; Larina, Irina V | Frontiers in physiology. | 25191274 | 2014; |
| A lymphatic defect causes ocular hypertension and glaucoma in mice. | Thomson, Benjamin R; Heinen, Stefan; Jeansson, Marie; Ghosh, Asish K; Fatima, Anees; Sung, Hoon-Ki; Onay, Tuncer; Chen, Hui; Yamaguchi, Shinji; Economides, Aris N; Flenniken, Ann; Gale, Nicholas W; Hong, Young-Kwon; Fawzi, Amani; Liu, Xiaorong; Kume, Tsut | The Journal of clinical investigation. | 25202984 | 2014 Oct; |
| Right Ventricular Epicardial Fibrosis in Mice With Sternal Segment Dislocation. | Adissu, H A; Medhanie, G A; Morikawa, L; White, J K; Newbigging, S; McKerlie, C | Veterinary pathology. | 25281652 | 2014 Oct 3; |
| Impact of temporal variation on design and analysis of mouse knockout phenotyping studies. | Karp, Natasha A; Speak, Anneliese O; White, Jacqueline K; Adams, David J; Hrabe de Angelis, Martin; Herault, Yann; Mott, Richard F | PloS one. | 25343444 | 2014; |
| Differentiating untreated and cross-linked porcine corneas of the same measured stiffness with optical coherence elastography. | Li, Jiasong; Han, Zhaolong; Singh, Manmohan; Twa, Michael D; Larin, Kirill V | Journal of biomedical optics. | 25408955 | 2014 Nov; |
| Optical coherence elastography for tissue characterization: a review. | Wang, Shang; Larin, Kirill V | Journal of biophotonics. | 25412100 | 2015 Apr; |
| Noncontact depth-resolved micro-scale optical coherence elastography of the cornea. | Wang, Shang; Larin, Kirill V | Biomedical optics express. | 25426312 | 2014 Nov 01; |
| A common control group - optimising the experiment design to maximise sensitivity. | Bate, Simon; Karp, Natasha A | PloS one. | 25504147 | 2014; |
| Optical coherence tomography guided microinjections in live mouse embryos: high-resolution targeted manipulation for mouse embryonic research. | Syed, Saba H; Coughlin, Andrew J; Garcia, Monica D; Wang, Shang; West, Jennifer L; Larin, Kirill V; Larina, Irina V | Journal of biomedical optics. | 25581495 | 2015 May; |
| A lacZ reporter gene expression atlas for 313 adult KOMP mutant mouse lines. | West, David B; Pasumarthi, Ravi K; Baridon, Brian; Djan, Esi; Trainor, Amanda; Griffey, Stephen M; Engelhard, Eric K; Rapp, Jared; Li, Bowen; de Jong, Pieter J; Lloyd, K C Kent | Genome research. | 25591789 | 2015 Apr; |
| Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes. | Oellrich, Anika; Collier, Nigel; Smedley, Damian; Groza, Tudor | PloS one. | 25607983 | 2015; |
| Taurodontism, variations in tooth number, and misshapened crowns in Wnt10a null mice and human kindreds. | Yang, Jie; Wang, Shih-Kai; Choi, Murim; Reid, Bryan M; Hu, Yuanyuan; Lee, Yuan-Ling; Herzog, Curtis R; Kim-Berman, Hera; Lee, Moses; Benke, Paul J; Lloyd, K C Kent; Simmer, James P; Hu, Jan C-C | Molecular genetics & genomic medicine. | 25629078 | 2015 Jan; |
| Quantitative assessment of corneal viscoelasticity using optical coherence elastography and a modified Rayleigh-Lamb equation. | Han, Zhaolong; Aglyamov, Salavat R; Li, Jiasong; Singh, Manmohan; Wang, Shang; Vantipalli, Srilatha; Wu, Chen; Liu, Chih-Hao; Twa, Michael D; Larin, Kirill V | Journal of biomedical optics. | 25649624 | 2015 Feb; |
| Algorithms for improved 3-D reconstruction of live mammalian embryo vasculature from optical coherence tomography data. | Kulkarni, Prathamesh M; Rey-Villamizar, Nicolas; Merouane, Amine; Sudheendran, Narendran; Wang, Shang; Garcia, Monica; Larina, Irina V; Roysam, Badrinath; Larin, Kirill V | Quantitative imaging in medicine and surgery. | 25694962 | 2015 Feb; |
| Automatic concept recognition using the human phenotype ontology reference and test suite corpora. | Groza, Tudor; Köhler, Sebastian; Doelken, Sandra; Collier, Nigel; Oellrich, Anika; Smedley, Damian; Couto, Francisco M; Baynam, Gareth; Zankl, Andreas; Robinson, Peter N | Database : the journal of biological databases and curation. | 25725061 | 2015; |
| Validation of simple sequence length polymorphism regions of commonly used mouse strains for marker assisted speed congenics screening. | Gurumurthy, Channabasavaiah B; Joshi, Poonam S; Kurz, Scott G; Ohtsuka, Masato; Quadros, Rolen M; Harms, Donald W; Lloyd, K C Kent | International journal of genomics. | 25815306 | 2015; |
| Quantitative methods for reconstructing tissue biomechanical properties in optical coherence elastography: a comparison study. | Han, Zhaolong; Li, Jiasong; Singh, Manmohan; Wu, Chen; Liu, Chih-hao; Wang, Shang; Idugboe, Rita; Raghunathan, Raksha; Sudheendran, Narendran; Aglyamov, Salavat R; Twa, Michael D; Larin, Kirill V | Physics in medicine and biology. | 25860076 | 2015 May 7; |
| Linking gene expression to phenotypes via pathway information. | Papatheodorou, Irene; Oellrich, Anika; Smedley, Damian | Journal of biomedical semantics. | 25901272 | 2015; |
| Actin cytoskeletal remodeling with protrusion formation is essential for heart regeneration in Hippo-deficient mice. | Morikawa, Yuka; Zhang, Min; Heallen, Todd; Leach, John; Tao, Ge; Xiao, Yang; Bai, Yan; Li, Wei; Willerson, James T; Martin, James F | Science signaling. | 25943351 | 2015 May 5; |
| WGE: a CRISPR database for genome engineering. | Hodgkins, Alex; Farne, Anna; Perera, Sajith; Grego, Tiago; Parry-Smith, David J; Skarnes, William C; Iyer, Vivek | Bioinformatics (Oxford, England). | 25979474 | 2015 Sep 15; |
| CRISPR-Cas9-mediated genome editing and guide RNA design. | Wiles, Michael V; Qin, Wenning; Cheng, Albert W; Wang, Haoyi | Mammalian genome : official journal of the International Mammalian Genome Society. | 25991564 | 2015 Oct; |
| Applying the ARRIVE Guidelines to an In Vivo Database. | Karp, Natasha A; Meehan, Terry F; Morgan, Hugh; Mason, Jeremy C; Blake, Andrew; Kurbatova, Natalja; Smedley, Damian; Jacobsen, Julius; Mott, Richard F; Iyer, Vivek; Matthews, Peter; Melvin, David G; Wells, Sara; Flenniken, Ann M; Masuya, Hiroshi; Wakana, Shigeharu; White, Jacqueline K; Lloyd, K C Kent; Reynolds, Corey L; Paylor, Richard; West, David B; Svenson, Karen L; Chesler, Elissa J; de Angelis, Martin Hrab?; Tocchini-Valentini, Glauco P; Sorg, Tania; Herault, Yann; Parkinson, Helen; Mallon, Ann-Marie; Brown, Steve D M | PLoS biology. | 25992600 | 2015 May; |
| Phase-sensitive optical coherence elastography at 1.5 million A-Lines per second. | Singh, Manmohan; Wu, Chen; Liu, Chih-Hao; Li, Jiasong; Schill, Alexander; Nair, Achuth; Larin, Kirill V | Optics letters. | 26030564 | 2015 Jun 1; |
| Reproducibility: use mouse biobanks or lose them. | Lloyd, Kent; Franklin, Craig; Lutz, Cat; Magnuson, Terry | Nature. | 26062496 | 2015 Jun 11; |
| Disease insights through cross-species phenotype comparisons. | Haendel, Melissa A; Vasilevsky, Nicole; Brush, Matthew; Hochheiser, Harry S; Jacobsen, Julius; Oellrich, Anika; Mungall, Christopher J; Washington, Nicole; Köhler, Sebastian; Lewis, Suzanna E; Robinson, Peter N; Smedley, Damian | Mammalian genome : official journal of the International Mammalian Genome Society. | 26092691 | 2015 Oct; |
| Analysis of the effects of curvature and thickness on elastic wave velocity in cornea-like structures by finite element modeling and optical coherence elastography. | Han, Zhaolong; Li, Jiasong; Singh, Manmohan; Aglyamov, Salavat R; Wu, Chen; Liu, Chih-Hao; Larin, Kirill V | Applied physics letters. | 26130825 | 2015 Jun 08; |
| PhenStat: A Tool Kit for Standardized Analysis of High Throughput Phenotypic Data. | Kurbatova, Natalja; Mason, Jeremy C; Morgan, Hugh; Meehan, Terrence F; Karp, Natasha A | PloS one. | 26147094 | 2015; |
| High-resolution three-dimensional in vivo imaging of mouse oviduct using optical coherence tomography. | Burton, Jason C; Wang, Shang; Stewart, C Allison; Behringer, Richard R; Larina, Irina V | Biomedical optics express. | 26203393 | 2015 Jul 1; |
| Precision medicine: Look to the mice. | Lloyd, K C Kent; Meehan, Terry; Beaudet, Arthur; Murray, Steve; Svenson, Karen; McKerlie, Colin; West, David; Morse, Iva; Parkinson, Helen; Brown, Steve; Mallon, Ann-Marie; Moore, Mark | Science (New York, N.Y.). | 26206923 | 2015 Jul 24; |
| Principles and application of LIMS in mouse clinics. | Maier, Holger; Schütt, Christine; Steinkamp, Ralph; Hurt, Anja; Schneltzer, Elida; Gormanns, Philipp; Lengger, Christoph; Griffiths, Mark; Melvin, David; Agrawal, Neha; Alcantara, Rafael; Evans, Arthur; Gannon, David; Holroyd, Simon; Kipp, Christian; Raj, | Mammalian genome : official journal of the International Mammalian Genome Society. | 26208973 | 2015 Oct; |
| Comparative visualization of genotype-phenotype relationships. | Yaikhom, Gagarine; Morgan, Hugh; Sneddon, Duncan; Retha, Ahmad; Atienza-Herrero, Julian; Blake, Andrew; Brown, James; Di Fenza, Armida; Fiegel, Tanja; Horner, Neil; Ring, Natalie; Santos, Luis; Westerberg, Henrik; Brown, Steve D M; Mallon, Ann-Marie | Nature methods. | 26226357 | 2015 Aug; |
| Reporter Gene Silencing in Targeted Mouse Mutants Is Associated with Promoter CpG Island Methylation. | Kirov, Julia V; Adkisson, Michael; Nava, A J; Cipollone, Andreana; Willis, Brandon; Engelhard, Eric K; Lloyd, K C Kent; de Jong, Pieter; West, David B | PloS one. | 26275310 | 2015; |
| In vivo micro-scale tomography of ciliary behavior in the mammalian oviduct. | Wang, Shang; Burton, Jason C; Behringer, Richard R; Larina, Irina V | Scientific reports. | 26279472 | 2015; |
| A mouse informatics platform for phenotypic and translational discovery. | Ring, Natalie; Meehan, Terrence F; Blake, Andrew; Brown, James; Chen, Chao-Kung; Conte, Nathalie; Di Fenza, Armida; Fiegel, Tanja; Horner, Neil; Jacobsen, Julius O B; Karp, Natasha; Lawson, Thomas; Mason, Jeremy C; Matthews, Peter; Morgan, Hugh; Relac, Mi | Mammalian genome : official journal of the International Mammalian Genome Society. | 26314589 | 2015 Oct; |
| Cardiovascular Patterning as Determined by Hemodynamic Forces and Blood Vessel Genetics. | Anderson, Gregory A; Udan, Ryan S; Dickinson, Mary E; Henkelman, R Mark | PloS one. | 26340748 | 2015; |
| Live four-dimensional optical coherence tomography reveals embryonic cardiac phenotype in mouse mutant. | Lopez 3rd, Andrew L; Wang, Shang; Larin, Kirill V; Overbeek, Paul A; Larina, Irina V | Journal of biomedical optics. | 26385422 | 2015; |
| A gene expression resource generated by genome-wide lacZ profiling in the mouse. | Tuck, Elizabeth; Estabel, Jeanne; Oellrich, Anika; Maguire, Anna Karin; Adissu, Hibret A; Souter, Luke; Siragher, Emma; Lillistone, Charlotte; Green, Angela L; Wardle-Jones, Hannah; Carragher, Damian M; Karp, Natasha A; Smedley, Damian; Adams, Niels C; Sa | Disease models & mechanisms. | 26398943 | 2015 Nov; |
| The digital revolution in phenotyping. | Oellrich, Anika; Collier, Nigel; Groza, Tudor; Rebholz-Schuhmann, Dietrich; Shah, Nigam; Bodenreider, Olivier; Boland, Mary Regina; Georgiev, Ivo; Liu, Hongfang; Livingston, Kevin; Luna, Augustin; Mallon, Ann-Marie; Manda, Prashanti; Robinson, Peter N; Rustici, Gabriella; Simon, Michelle; Wang, Liqin; Winnenburg, Rainer; Dumontier, Michel | Briefings in bioinformatics. | 26420780 | 2016 09; |
| Loss of arylformamidase with reduced thymidine kinase expression leads to impaired glucose tolerance. | Hugill, Alison J; Stewart, Michelle E; Yon, Marianne A; Probert, Fay; Cox, I Jane; Hough, Tertius A; Scudamore, Cheryl L; Bentley, Liz; Wall, Gary; Wells, Sara E; Cox, Roger D | Biology open. | 26432886 | 2015 Oct 02; |
| MMP21 is mutated in human heterotaxy and is required for normal left-right asymmetry in vertebrates. | Guimier, Anne; Gabriel, George C; Bajolle, Fanny; Tsang, Michael; Liu, Hui; Noll, Aaron; Schwartz, Molly; El Malti, Rajae; Smith, Laurie D; Klena, Nikolai T; Jimenez, Gina; Miller, Neil A; Oufadem, Myriam; Moreau de Bellaing, Anne; Yagi, Hisato; Saunders, Carol J; Baker, Candice N; Di Filippo, Sylvie; Peterson, Kevin A; Thiffault, Isabelle; Bole-Feysot, Christine; Cooley, Linda D; Farrow, Emily G; Masson, Cécile; Schoen, Patric; Deleuze, Jean-François; Nitschké, Patrick; Lyonnet, Stanislas; de Pontual, Loic; Murray, Stephen A; Bonnet, Damien; Kingsmore, Stephen F; Amiel, Jeanne; Bouvagnet, Patrice; Lo, Cecilia W; Gordon, Christopher T | Nature genetics. | 26437028 | 2015 Nov; |
| Elevation of 20-carbon long chain bases due to a mutation in serine palmitoyltransferase small subunit b results in neurodegeneration. | Zhao, Lihong; Spassieva, Stefka; Gable, Kenneth; Gupta, Sita D; Shi, Lan-Ying; Wang, Jieping; Bielawski, Jacek; Hicks, Wanda L; Krebs, Mark P; Naggert, Juergen; Hannun, Yusuf A; Dunn, Teresa M; Nishina, Patsy M | Proceedings of the National Academy of Sciences of the United States of America. | 26438849 | 2015 Oct 20; |
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| Yap and Taz play a crucial role in neural crest-derived craniofacial development. | Wang, Jun; Xiao, Yang; Hsu, Chih-Wei; Martinez-Traverso, Idaliz M; Zhang, Min; Bai, Yan; Ishii, Mamoru; Maxson, Robert E; Olson, Eric N; Dickinson, Mary E; Wythe, Joshua D; Martin, James F | Development (Cambridge, England). | 26718006 | 2016 Feb 1; |
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| Classifying murine glomerulonephritis using optical coherence tomography and optical coherence elastography. | Liu, Chih-Hao; Du, Yong; Singh, Manmohan; Wu, Chen; Han, Zhaolong; Li, Jiasong; Chang, Anthony; Mohan, Chandra; Larin, Kirill V | Journal of biophotonics. | 26791097 | 2016 Aug; |
| Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. | West, David B; Engelhard, Eric K; Adkisson, Michael; Nava, A J; Kirov, Julia V; Cipollone, Andreanna; Willis, Brandon; Rapp, Jared; de Jong, Pieter J; Lloyd, Kent C | PLoS genetics. | 26839965 | 2016 Feb; |
| Rotational imaging optical coherence tomography for full-body mouse embryonic imaging. | Wu, Chen; Sudheendran, Narendran; Singh, Manmohan; Larina, Irina V; Dickinson, Mary E; Larin, Kirill V | Journal of biomedical optics. | 26848543 | 2016 Feb; |
| Reporting phenotypes in mouse models when considering body size as a potential confounder. | Oellrich, Anika; Meehan, Terrence F; Parkinson, Helen; Sarntivijai, Sirarat; White, Jacqueline K; Karp, Natasha A | Journal of biomedical semantics | 26865945 | 2016 |
| Optical coherence tomography as a tool for real-time visual feedback and biomechanical assessment of dermal filler injections: preliminary results in a pig skin model. | Singh, Manmohan; Wang, Shang; Yee, Richard W; Larin, Kirill V | Experimental dermatology. | 26910121 | 2016 06; |
| Four-dimensional live imaging of hemodynamics in mammalian embryonic heart with Doppler optical coherence tomography. | Wang, Shang; Lakomy, David S; Garcia, Monica D; Lopez 3rd, Andrew L; Larin, Kirill V; Larina, Irina V | Journal of biophotonics. | 26996292 | 2016 Aug; |
| Mutations in SMG9, Encoding an Essential Component of Nonsense-Mediated Decay Machinery, Cause a Multiple Congenital Anomaly Syndrome in Humans and Mice. | Shaheen, Ranad; Anazi, Shams; Ben-Omran, Tawfeg; Seidahmed, Mohammed Zain; Caddle, L Brianna; Palmer, Kristina; Ali, Rehab; Alshidi, Tarfa; Hagos, Samya; Goodwin, Leslie; Hashem, Mais; Wakil, Salma M; Abouelhoda, Mohamed; Colak, Dilek; Murray, Stephen A; | American journal of human genetics. | 27018474 | 2016 Apr 7; |
| Rapid, noninvasive quantitation of skin disease in systemic sclerosis using optical coherence elastography. | Du, Yong; Liu, Chih-Hao; Lei, Ling; Singh, Manmohan; Li, Jiasong; Hicks, M John; Larin, Kirill V; Mohan, Chandra | Journal of biomedical optics. | 27048877 | 2016 Apr 30; |
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| Loss-of-Function Mutations in FRRS1L Lead to an Epileptic-Dyskinetic Encephalopathy. | Madeo, Marianna; Stewart, Michelle; Sun, Yuyang; Sahir, Nadia; Wiethoff, Sarah; Chandrasekar, Indra; Yarrow, Anna; Rosenfeld, Jill A; Yang, Yaping; Cordeiro, Dawn; McCormick, Elizabeth M; Muraresku, Colleen C; Jepperson, Tyler N; McBeth, Lauren J; Seidahmed, Mohammed Zain; El Khashab, Heba Y; Hamad, Muddathir; Azzedine, Hamid; Clark, Karl; Corrochano, Silvia; Wells, Sara; Elting, Mariet W; Weiss, Marjan M; Burn, Sabrina; Myers, Angela; Landsverk, Megan; Crotwell, Patricia L; Waisfisz, Quinten; Wolf, Nicole I; Nolan, Patrick M; Padilla-Lopez, Sergio; Houlden, Henry; Lifton, Richard; Mane, Shrikant; Singh, Brij B; Falk, Marni J; Mercimek-Mahmutoglu, Saadet; Bilguvar, Kaya; Salih, Mustafa A; Acevedo-Arozena, Abraham; Kruer, Michael C | American journal of human genetics. | 27236917 | 2016 Jun 2; |
| CRIPT exonic deletion and a novel missense mutation in a female with short stature, dysmorphic features, microcephaly, and pigmentary abnormalities. | Leduc, Magalie S; Niu, Zhiyv; Bi, Weimin; Zhu, Wenmiao; Miloslavskaya, Irene; Chiang, Theodore; Streff, Haley; Seavitt, John R; Murray, Stephen A; Eng, Christine; Chan, Audrey; Yang, Yaping; Lalani, Seema R | American journal of medical genetics. Part A. | 27250922 | 2016 Aug; |
| Pitx2 promotes heart repair by activating the antioxidant response after cardiac injury. | Tao, Ge; Kahr, Peter C; Morikawa, Yuka; Zhang, Min; Rahmani, Mahdis; Heallen, Todd R; Li, Lele; Sun, Zhao; Olson, Eric N; Amendt, Brad A; Martin, James F | Nature. | 27251288 | 2016 Jun 2; |
| Applicability, usability, and limitations of murine embryonic imaging with optical coherence tomography and optical projection tomography. | Singh, Manmohan; Raghunathan, Raksha; Piazza, Victor; Davis-Loiacono, Anjul M; Cable, Alex; Vedakkan, Tegy J; Janecek, Trevor; Frazier, Michael V; Nair, Achuth; Wu, Chen; Larina, Irina V; Dickinson, Mary E; Larin, Kirill V | Biomedical optics express. | 27375945 | 2016 Jun 01; |
| Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR. | Haeussler, Maximilian; Schönig, Kai; Eckert, Hélène; Eschstruth, Alexis; Mianné, Joffrey; Renaud, Jean-Baptiste; Schneider-Maunoury, Sylvie; Shkumatava, Alena; Teboul, Lydia; Kent, Jim; Joly, Jean-Stephane; Concordet, Jean-Paul | Genome biology. | 27380939 | 2016 Jul 05; |
| Evaluating the Effects of Riboflavin/UV-A and Rose-Bengal/Green Light Cross-Linking of the Rabbit Cornea by Noncontact Optical Coherence Elastography. | Singh, Manmohan; Li, Jiasong; Han, Zhaolong; Vantipalli, Srilatha; Liu, Chih-Hao; Wu, Chen; Raghunathan, Raksha; Aglyamov, Salavat R; Twa, Michael D; Larin, Kirill V | Investigative ophthalmology & visual science. | 27409461 | 2016 07 01; |
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| C13orf31 (FAMIN) is a central regulator of immunometabolic function. | Cader, M Zaeem; Boroviak, Katharina; Zhang, Qifeng; Assadi, Ghazaleh; Kempster, Sarah L; Sewell, Gavin W; Saveljeva, Svetlana; Ashcroft, Jonathan W; Clare, Simon; Mukhopadhyay, Subhankar; Brown, Karen P; Tschurtschenthaler, Markus; Raine, Tim; Doe, Brendan; Chilvers, Edwin R; Griffin, Jules L; Kaneider, Nicole C; Floto, R Andres; D'Amato, Mauro; Bradley, Allan; Wakelam, Michael J O; Dougan, Gordon; Kaser, Arthur | Nature immunology. | 27478939 | 2016 09; |
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| Investigating Elastic Anisotropy of the Porcine Cornea as a Function of Intraocular Pressure With Optical Coherence Elastography. | Singh, Manmohan; Li, Jiasong; Han, Zhaolong; Wu, Chen; Aglyamov, Salavat R; Twa, Michael D; Larin, Kirill V | Journal of refractive surgery (Thorofare, N.J. : 1995). | 27505317 | 2016 Aug 01; |
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| Three-dimensional microCT imaging of mouse development from early post-implantation to early postnatal stages. | Hsu, Chih-Wei; Wong, Leeyean; Rasmussen, Tara L; Kalaga, Sowmya; McElwee, Melissa L; Keith, Lance C; Bohat, Ritu; Seavitt, John R; Beaudet, Arthur L; Dickinson, Mary E | Developmental biology. | 27671873 | 2016 Nov 15; |
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| APOBEC1 complementation factor (A1CF) is dispensable for C-to-U RNA editing in vivo. | Snyder, Elizabeth M; McCarty, Christopher; Mehalow, Adrienne; Svenson, Karen L; Murray, Stephen A; Korstanje, Ron; Braun, Robert E | RNA (New York, N.Y.). | 28069890 | 2017 04; |
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| Of mice and CRISPR: The post-CRISPR future of the mouse as a model system for the human condition. | Liu, Edison T; Bolcun-Filas, Ewelina; Grass, David S; Lutz, Cathleen; Murray, Steve; Shultz, Lenny; Rosenthal, Nadia | EMBO reports. | 28119373 | 2017 Feb; |
| Applanation optical coherence elastography: noncontact measurement of intraocular pressure, corneal biomechanical properties, and corneal geometry with a single instrument. | Singh, Manmohan; Han, Zhaolong; Nair, Achuth; Schill, Alexander; Twa, Michael D; Larin, Kirill V | Journal of biomedical optics. | 28241272 | 2017 02 01; |
| A bioluminescence reporter mouse that monitors expression of constitutively active ?-catenin. | Szwarc, Maria M; Kommagani, Ramakrishna; Peavey, Mary C; Hai, Lan; Lonard, David M; Lydon, John P | PloS one. | 28253313 | 2017; |
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| Arap1 Deficiency Causes Photoreceptor Degeneration in Mice. | Moshiri, Ala; Humpal, Devin; Leonard, Brian C; Imai, Denise M; Tham, Addy; Bower, Lynette; Clary, Dave; Glaser, Thomas M; Lloyd, K C Kent; Murphy, Christopher J | Investigative ophthalmology & visual science. | 28324111 | 2017 Mar 01; |
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| A Population Study of Common Ocular Abnormalities in C57BL/6N rd8 Mice. | Moore, Bret A; Roux, Michel J; Sebbag, Lionel; Cooper, Ann; Edwards, Sydney G; Leonard, Brian C; Imai, Denise M; Griffey, Stephen; Bower, Lynette; Clary, Dave; Lloyd, K C Kent; Hérault, Yann; Thomasy, Sara M; Murphy, Christopher J; Moshiri, Ala | Investigative ophthalmology & visual science. | 29847629 | 2018 May 01; |
| High-resolution ?CT of a mouse embryo using a compact laser-driven X-ray betatron source. | Cole, Jason M; Symes, Daniel R; Lopes, Nelson C; Wood, Jonathan C; Poder, Kristjan; Alatabi, Saleh; Botchway, Stanley W; Foster, Peta S; Gratton, Sarah; Johnson, Sara; Kamperidis, Christos; Kononenko, Olena; De Lazzari, Michael; Palmer, Charlotte A J; Rusby, Dean; Sanderson, Jeremy; Sandholzer, Michael; Sarri, Gianluca; Szoke-Kovacs, Zsombor; Teboul, Lydia; Thompson, James M; Warwick, Jonathan R; Westerberg, Henrik; Hill, Mark A; Norris, Dominic P; Mangles, Stuart P D; Najmudin, Zulfikar | Proceedings of the National Academy of Sciences of the United States of America. | 29871946 | 2018 06 19; |
| Enhancing the Potency and Specificity of Engineered T Cells for Cancer Treatment. | Sukumaran, Sujita; Watanabe, Norihiro; Bajgain, Pradip; Raja, Kanchana; Mohammed, Somala; Fisher, William E; Brenner, Malcolm K; Leen, Ann M; Vera, Juan F | Cancer discovery. | 29880586 | 2018 Aug; |
| Ca2+-binding protein NECAB2 facilitates inflammatory pain hypersensitivity. | Zhang, Ming-Dong; Su, Jie; Adori, Csaba; Cinquina, Valentina; Malenczyk, Katarzyna; Girach, Fatima; Peng, Changgeng; Ernfors, Patrik; Löw, Peter; Borgius, Lotta; Kiehn, Ole; Watanabe, Masahiko; Uhlén, Mathias; Mitsios, Nicholas; Mulder, Jan; Harkany, Tibor; Hökfelt, Tomas | The Journal of clinical investigation. | 29893745 | 2018 08 31; |
| FRMD8 promotes inflammatory and growth factor signalling by stabilising the iRhom/ADAM17 sheddase complex. | Künzel, Ulrike; Grieve, Adam Graham; Meng, Yao; Sieber, Boris; Cowley, Sally A; Freeman, Matthew | eLife. | 29897336 | 2018 06 13; |
| Loss of Trem2 in microglia leads to widespread disruption of cell coexpression networks in mouse brain. | Carbajosa, Guillermo; Malki, Karim; Lawless, Nathan; Wang, Hong; Ryder, John W; Wozniak, Eva; Wood, Kristie; Mein, Charles A; Dobson, Richard J B; Collier, David A; O'Neill, Michael J; Hodges, Angela K; Newhouse, Stephen J | Neurobiology of aging. | 29906661 | 2018 09; |
| Comparative analysis of single-stranded DNA donors to generate conditional null mouse alleles. | Lanza, Denise G; Gaspero, Angelina; Lorenzo, Isabel; Liao, Lan; Zheng, Ping; Wang, Ying; Deng, Yu; Cheng, Chonghui; Zhang, Chuansheng; Seavitt, John R; DeMayo, Francesco J; Xu, Jianming; Dickinson, Mary E; Beaudet, Arthur L; Heaney, Jason D | BMC biology. | 29925370 | 2018 Jun 21; |
| Application of long single-stranded DNA donors in genome editing: generation and validation of mouse mutants. | Codner, Gemma F; Mianné, Joffrey; Caulder, Adam; Loeffler, Jorik; Fell, Rachel; King, Ruairidh; Allan, Alasdair J; Mackenzie, Matthew; Pike, Fran J; McCabe, Christopher V; Christou, Skevoulla; Joynson, Sam; Hutchison, Marie; Stewart, Michelle E; Kumar, Saumya; Simon, Michelle M; Agius, Loranne; Anstee, Quentin M; Volynski, Kirill E; Kullmann, Dimitri M; Wells, Sara; Teboul, Lydia | BMC biology. | 29925374 | 2018 Jun 21; |
| C.B-17 SCID mice develop epicardial calcinosis with unaltered cardiac function. | Raghunathan, Suchi; Reynolds, Corey L; Schwartz, Robert J; Stewart, M David; McConnell, Bradley K | Fundamental & clinical pharmacology. | 29959870 | 2018 Jun 30; |
| Rbfox-Splicing Factors Maintain Skeletal Muscle Mass by Regulating Calpain3 and Proteostasis. | Singh, Ravi K; Kolonin, Arseniy M; Fiorotto, Marta L; Cooper, Thomas A | Cell reports. | 29972780 | 2018 Jul 03; |
| Activation of the Immune-Metabolic Receptor GPR84 Enhances Inflammation and Phagocytosis in Macrophages. | Recio, Carlota; Lucy, Daniel; Purvis, Gareth S D; Iveson, Poppy; Zeboudj, Lynda; Iqbal, Asif J; Lin, Daniel; O'Callaghan, Chris; Davison, Lucy; Griesbach, Esther; Russell, Angela J; Wynne, Graham M; Dib, Lea; Monaco, Claudia; Greaves, David R | Frontiers in immunology. | 29973940 | 2018; |
| Sympathetic inputs regulate adaptive thermogenesis in brown adipose tissue through cAMP-Salt inducible kinase axis. | Paulo, Esther; Wu, Dongmei; Wang, Yangmeng; Zhang, Yun; Wu, Yixuan; Swaney, Danielle L; Soucheray, Margaret; Jimenez-Morales, David; Chawla, Ajay; Krogan, Nevan J; Wang, Biao | Scientific reports. | 30030465 | 2018 Jul 20; |
| TRPC4/TRPC5 channels mediate adverse reaction to the cancer cell cytotoxic agent (-)-Englerin A. | Cheung, Sin Ying; Henrot, Matthias; Al-Saad, Mohammad; Baumann, Matthias; Muller, Heiko; Unger, Anke; Rubaiy, Hussein N; Mathar, Ilka; Dinkel, Klaus; Nussbaumer, Peter; Klebl, Bert; Freichel, Marc; Rode, Baptiste; Trainor, Sebastian; Clapcote, Steven J; Christmann, Mathias; Waldmann, Herbert; Abbas, Syed Khawar; Beech, David J; Vasudev, Naveen S | Oncotarget. | 30038709 | 2018 Jul 03; |
| Engineering Point Mutant and Epitope-Tagged Alleles in Mice Using Cas9 RNA-Guided Nuclease. | Gertsenstein, Marina; Nutter, Lauryl M J | Current protocols in mouse biology. | 30040228 | 2018 Mar; |
| Beyond autophagy: a novel role for autism-linked Wdfy3 in brain mitophagy. | Napoli, Eleonora; Song, Gyu; Panoutsopoulos, Alexios; Riyadh, M Asrafuzzaman; Kaushik, Gaurav; Halmai, Julian; Levenson, Richard; Zarbalis, Konstantinos S; Giulivi, Cecilia | Scientific reports. | 30054502 | 2018 Jul 27; |
| Characterization of Tissue Plasminogen Activator Expression and Trafficking in the Adult Murine Brain. | Stevenson, Tamara K; Lawrence, Daniel A | eNeuro. | 30090852 | 2018 Jul-Aug; |
| The International Mouse Phenotyping Consortium (IMPC): a functional catalogue of the mammalian genome that informs conservation. | Muñoz-Fuentes, Violeta; Cacheiro, Pilar; Meehan, Terrence F; Aguilar-Pimentel, Juan Antonio; Brown, Steve D M; Flenniken, Ann M; Flicek, Paul; Galli, Antonella; Mashhadi, Hamed Haseli; Hrab? de Angelis, Martin; Kim, Jong Kyoung; Lloyd, K C Kent; McKerlie, Colin; Morgan, Hugh; Murray, Stephen A; Nutter, Lauryl M J; Reilly, Patrick T; Seavitt, John R; Seong, Je Kyung; Simon, Michelle; Wardle-Jones, Hannah; Mallon, Ann-Marie; Smedley, Damian; Parkinson, Helen E; IMPC consortium | Conservation genetics (Print). | 30100824 | 2018; |
| Ndr kinases regulate retinal interneuron proliferation and homeostasis. | Léger, Hélène; Santana, Evelyn; Leu, N Adrian; Smith, Eliot T; Beltran, William A; Aguirre, Gustavo D; Luca, Francis C | Scientific reports. | 30135513 | 2018 Aug 22; |
| Reciprocal control of excitatory synapse numbers by Wnt and Wnt inhibitor PRR7 secreted on exosomes. | Lee, Sang H; Shin, Seung Min; Zhong, Peng; Kim, Hyun-Taek; Kim, Dong-Il; Kim, June Myoung; Do Heo, Won; Kim, Dae-Won; Yeo, Chang-Yeol; Kim, Cheol-Hee; Liu, Qing-Song | Nature communications. | 30143647 | 2018 08 24; |
| Rapid and Integrative Discovery of Retina Regulatory Molecules. | Albrecht, Nicholas E; Alevy, Jonathan; Jiang, Danye; Burger, Courtney A; Liu, Brian I; Li, Fenge; Wang, Julia; Kim, Seon-Young; Hsu, Chih-Wei; Kalaga, Sowmya; Udensi, Uchechukwu; Asomugha, Chinwe; Bohat, Ritu; Gaspero, Angelina; Justice, Monica J; Westenskow, Peter D; Yamamoto, Shinya; Seavitt, John R; Beaudet, Arthur L; Dickinson, Mary E; Samuel, Melanie A | Cell reports. | 30157441 | 2018 Aug 28; |
| Steroid Receptor Coactivator-2 Controls the Pentose Phosphate Pathway through RPIA in Human Endometrial Cancer Cells. | Szwarc, Maria M; Kommagani, Ramakrishna; Putluri, Vasanta; Dubrulle, Julien; Stossi, Fabio; Mancini, Michael A; Coarfa, Cristian; Lanz, Rainer B; Putluri, Nagireddy; DeMayo, Francesco J; Lydon, John P; O'Malley, Bert W | Scientific reports. | 30177747 | 2018 Sep 03; |
| Comparison of cryosurvival and spermatogenesis efficiency of cryopreserved neonatal mouse testicular tissue between three vitrification protocols and controlled-rate freezing. | Yildiz, Cengiz; Mullen, Brendan; Jarvi, Keith; McKerlie, Colin; Lo, Kirk C | Cryobiology. | 30195700 | 2018 10; |
| Haploinsufficiency of autism spectrum disorder candidate gene NUAK1 impairs cortical development and behavior in mice. | Courchet, Virginie; Roberts, Amanda J; Meyer-Dilhet, Géraldine; Del Carmine, Peggy; Lewis Jr, Tommy L; Polleux, Franck; Courchet, Julien | Nature communications. | 30327473 | 2018 10 16; |
| CRISPR -Mediated Expression of the Fetal Scn5a Isoform in Adult Mice Causes Conduction Defects and Arrhythmias. | Pang, Paul D; Alsina, Katherina M; Cao, Shuyi; Koushik, Amrita B; Wehrens, Xander H T; Cooper, Thomas A | Journal of the American Heart Association. | 30371314 | 2018 Oct 02; |
| Sebaceous gland abnormalities in fatty acyl CoA reductase 2 (Far2) null mice result in primary cicatricial alopecia. | Sundberg, John P; Shen, Tong; Fiehn, Oliver; Rice, Robert H; Silva, Kathleen A; Kennedy, Victoria E; Gott, Nicholas E; Dionne, Louise A; Bechtold, Lesley S; Murray, Stephen A; Kuiper, Raoul; Pratt, C Herbert | PloS one. | 30372477 | 2018; |
| Fibroblast Growth Factor Binding Protein 3 (FGFBP3) impacts carbohydrate and lipid metabolism. | Tassi, Elena; Garman, Khalid A; Schmidt, Marcel O; Ma, Xiaoting; Kabbara, Khaled W; Uren, Aykut; Tomita, York; Goetz, Regina; Mohammadi, Moosa; Wilcox, Christopher S; Riegel, Anna T; Carlstrom, Mattias; Wellstein, Anton | Scientific reports. | 30374109 | 2018 Oct 29; |
| FAM92A Underlies Nonsyndromic Postaxial Polydactyly in Humans and an Abnormal Limb and Digit Skeletal Phenotype in Mice. | Schrauwen, Isabelle; Giese, Arnaud Pj; Aziz, Abdul; Lafont, David Tino; Chakchouk, Imen; Santos-Cortez, Regie Lyn P; Lee, Kwanghyuk; Acharya, Anushree; Khan, Falak Sher; Ullah, Asmat; Nickerson, Deborah A; Bamshad, Michael J; Ali, Ghazanfar; Riazuddin, Saima; Ansar, Muhammad; Ahmad, Wasim; Ahmed, Zubair M; Leal, Suzanne M | Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research. | 30395363 | 2019 Feb; |
| The deubiquitinase MYSM1 dampens NOD2-mediated inflammation and tissue damage by inactivating the RIP2 complex. | Panda, Swarupa; Gekara, Nelson O | Nature communications. | 30405132 | 2018 11 07; |
| WDFY4 is required for cross-presentation in response to viral and tumor antigens. | Theisen, Derek J; Davidson 4th, Jesse T; Briseño, Carlos G; Gargaro, Marco; Lauron, Elvin J; Wang, Qiuling; Desai, Pritesh; Durai, Vivek; Bagadia, Prachi; Brickner, Joshua R; Beatty, Wandy L; Virgin, Herbert W; Gillanders, William E; Mosammaparast, Nima; Diamond, Michael S; Sibley, L David; Yokoyama, Wayne; Schreiber, Robert D; Murphy, Theresa L; Murphy, Kenneth M | Science (New York, N.Y.). | 30409884 | 2018 11 09; |
| IFNAR2 Is Required for Anti-influenza Immunity and Alters Susceptibility to Post-influenza Bacterial Superinfections. | Shepardson, Kelly M; Larson, Kyle; Johns, Laura L; Stanek, Kayla; Cho, Hanbyul; Wellham, Julia; Henderson, Haley; Rynda-Apple, Agnieszka | Frontiers in immunology. | 30473701 | 2018; |
| Utility of HbA1c assessment in people with diabetes awaiting liver transplantation. | Bhattacharjee, D; Vracar, S; Round, R A; Nightingale, P G; Williams, J A; Gkoutos, G V; Stratton, I M; Parker, R; Luzio, S D; Webber, J; Manley, S E; Roberts, G A; Ghosh, S | Diabetic medicine : a journal of the British Diabetic Association. | 30474191 | 2018 Nov 26; |
| Generation of a highly efficient and tissue-specific tryptophan hydroxylase 1 knockout mouse model. | Kim, Hyeongseok; Kim, Yeong Gi; Choi, Wonsuk; Moon, Joon Ho; Hwang, Inseon; Kim, Kyuho; Yadav, Vijay K; Karsenty, Gerard; Jeong, Ji-Seon; Kim, Hail | Scientific reports. | 30518775 | 2018 Dec 05; |
| Novel metabolic disorders in skeletal muscle of Lipodystrophic Bscl2/Seipin deficient mice. | Xu, Wenqiong; Zhou, Hongyi; Xuan, Hongzhuan; Saha, Pradip; Wang, Gongxian; Chen, Weiqin | Molecular and cellular endocrinology. | 30521848 | 2019 Feb 15; |
| Gi/o protein-coupled receptors in dopamine neurons inhibit the sodium leak channel NALCN. | Philippart, Fabian; Khaliq, Zayd M | eLife. | 30556810 | 2018 12 17; |
| Identification of genes required for eye development by high-throughput screening of mouse knockouts. | Moore, Bret A; Leonard, Brian C; Sebbag, Lionel; Edwards, Sydney G; Cooper, Ann; Imai, Denise M; Straiton, Ewan; Santos, Luis; Reilly, Christopher; Griffey, Stephen M; Bower, Lynette; Clary, David; Mason, Jeremy; Roux, Michel J; Meziane, Hamid; Herault, Yann; International Mouse Phenotyping Consortium; McKerlie, Colin; Flenniken, Ann M; Nutter, Lauryl M J; Berberovic, Zorana; Owen, Celeste; Newbigging, Susan; Adissu, Hibret; Eskandarian, Mohammed; Hsu, Chih-Wei; Kalaga, Sowmya; Udensi, Uchechukwu; Asomugha, Chinwe; Bohat, Ritu; Gallegos, Juan J; Seavitt, John R; Heaney, Jason D; Beaudet, Arthur L; Dickinson, Mary E; Justice, Monica J; Philip, Vivek; Kumar, Vivek; Svenson, Karen L; Braun, Robert E; Wells, Sara; Cater, Heather; Stewart, Michelle; Clementson-Mobbs, Sharon; Joynson, Russell; Gao, Xiang; Suzuki, Tomohiro; Wakana, Shigeharu; Smedley, Damian; Seong, J K; Tocchini-Valentini, Glauco; Moore, Mark; Fletcher, Colin; Karp, Natasha; Ramirez-Solis, Ramiro; White, Jacqueline K; de Angelis, Martin Hrabe; Wurst, Wolfgang; Thomasy, Sara M; Flicek, Paul; Parkinson, Helen; Brown, Steve D M; Meehan, Terrence F; Nishina, Patsy M; Murray, Stephen A; Krebs, Mark P; Mallon, Ann-Marie; Lloyd, K C Kent; Murphy, Christopher J; Moshiri, Ala | Communications biology. | 30588515 | 2018; |
| KCa1.1 and Kv1.3 channels regulate the interactions between fibroblast-like synoviocytes and T lymphocytes during rheumatoid arthritis. | Tanner, Mark R; Pennington, Michael W; Chauhan, Satendra S; Laragione, Teresina; Gulko, Pércio S; Beeton, Christine | Arthritis research & therapy. | 30612588 | 2019 Jan 07; |
| Mono-ADP-Ribosylhydrolase MACROD2 Is Dispensable for Murine Responses to Metabolic and Genotoxic Insults. | Lo Re, Oriana; Mazza, Tommaso; Vinciguerra, Manlio | Frontiers in genetics. | 30619475 | 2018; |
| Generating mouse models for biomedical research: technological advances. | Gurumurthy, Channabasavaiah B; Lloyd, Kevin C Kent | Disease models & mechanisms. | 30626588 | 2019 01 08; |
| Using CRISPR/Cas9 engineering to generate a mouse with a conditional knockout allele for the promyelocytic leukemia zinc finger transcription factor. | Hai, Lan; Szwarc, Maria M; Lanza, Denise G; Heaney, Jason D; Lydon, John P | Genesis (New York, N.Y. : 2000). | 30628160 | 2019 Mar; |
| Activin-like kinase 5 (ALK5) inactivation in the mouse uterus results in metastatic endometrial carcinoma. | Monsivais, Diana; Peng, Jia; Kang, Yibin; Matzuk, Martin M | Proceedings of the National Academy of Sciences of the United States of America. | 30655341 | 2019 Feb 26; |
| Large-scale discovery of mouse transgenic integration sites reveals frequent structural variation and insertional mutagenesis. | Goodwin, Leslie O; Splinter, Erik; Davis, Tiffany L; Urban, Rachel; He, Hao; Braun, Robert E; Chesler, Elissa J; Kumar, Vivek; van Min, Max; Ndukum, Juliet; Philip, Vivek M; Reinholdt, Laura G; Svenson, Karen; White, Jacqueline K; Sasner, Michael; Lutz, Cathleen; Murray, Stephen A | Genome research. | 30659012 | 2019 Mar; |
| Loss of function of NCOR1 and NCOR2 impairs memory through a novel GABAergic hypothalamus-CA3 projection. | Zhou, Wenjun; He, Yanlin; Rehman, Atteeq U; Kong, Yan; Hong, Sungguan; Ding, Guolian; Yalamanchili, Hari Krishna; Wan, Ying-Wooi; Paul, Basil; Wang, Chuhan; Gong, Yingyun; Zhou, Wenxian; Liu, Hao; Dean, John; Scalais, Emmanuel; O'Driscoll, Mary; Morton, Jenny E V; DDD study; Hou, Xinguo; Wu, Qi; Tong, Qingchun; Liu, Zhandong; Liu, Pengfei; Xu, Yong; Sun, Zheng | Nature neuroscience. | 30664766 | 2019 02; |
| Loss of Frrs1l disrupts synaptic AMPA receptor function, and results in neurodevelopmental, motor, cognitive and electrographical abnormalities. | Stewart, Michelle; Lau, Petrina; Banks, Gareth; Bains, Rasneer Sonia; Castroflorio, Enrico; Oliver, Peter L; Dixon, Christine L; Kruer, Michael C; Kullmann, Dimitri M; Acevedo-Arozena, Abraham; Wells, Sara E; Corrochano, Silvia; Nolan, Patrick M | Disease models & mechanisms. | 30692144 | 2019 Feb 22; |
| Reactivation of a developmental Bmp2 signaling center is required for therapeutic control of the murine periosteal niche. | Salazar, Valerie S; Capelo, Luciane P; Cantù, Claudio; Zimmerli, Dario; Gosalia, Nehal; Pregizer, Steven; Cox, Karen; Ohte, Satoshi; Feigenson, Marina; Gamer, Laura; Nyman, Jeffry S; Carey, David J; Economides, Aris; Basler, Konrad; Rosen, Vicki | eLife. | 30735122 | 2019 Feb 08; |
| Transcriptional analysis of Foxp3+ Tregs and functions of two identified molecules during resolution of ALI. | Mock, Jason R; Dial, Catherine F; Tune, Miriya K; Norton, Dustin L; Martin, Jessica R; Gomez, John C; Hagan, Robert S; Dang, Hong; Doerschuk, Claire M | JCI insight. | 30753170 | 2019 Mar 21; |
| Bi-allelic Variants in TONSL Cause SPONASTRIME Dysplasia and a Spectrum of Skeletal Dysplasia Phenotypes. | Burrage, Lindsay C; Reynolds, John J; Baratang, Nissan Vida; Phillips, Jennifer B; Wegner, Jeremy; McFarquhar, Ashley; Higgs, Martin R; Christiansen, Audrey E; Lanza, Denise G; Seavitt, John R; Jain, Mahim; Li, Xiaohui; Parry, David A; Raman, Vandana; Chitayat, David; Chinn, Ivan K; Bertuch, Alison A; Karaviti, Lefkothea; Schlesinger, Alan E; Earl, Dawn; Bamshad, Michael; Savarirayan, Ravi; Doddapaneni, Harsha; Muzny, Donna; Jhangiani, Shalini N; Eng, Christine M; Gibbs, Richard A; Bi, Weimin; Emrick, Lisa; Rosenfeld, Jill A; Postlethwait, John; Westerfield, Monte; Dickinson, Mary E; Beaudet, Arthur L; Ranza, Emmanuelle; Huber, Celine; Cormier-Daire, Valérie; Shen, Wei; Mao, Rong; Heaney, Jason D; Orange, Jordan S; University of Washington Center for Mendelian Genomics; Undiagnosed Diseases Network; Bertola, Débora; Yamamoto, Guilherme L; Baratela, Wagner A R; Butler, Merlin G; Ali, Asim; Adeli, Mehdi; Cohn, Daniel H; Krakow, Deborah; Jackson, Andrew P; Lees, Melissa; Offiah, Amaka C; Carlston, Colleen M; Carey, John C; Stewart, Grant S; Bacino, Carlos A; Campeau, Philippe M; Lee, Brendan | American journal of human genetics. | 30773277 | 2019 Mar 07; |
| YAP Partially Reprograms Chromatin Accessibility to Directly Induce Adult Cardiogenesis In Vivo. | Monroe, Tanner O; Hill, Matthew C; Morikawa, Yuka; Leach, John P; Heallen, Todd; Cao, Shuyi; Krijger, Peter H L; de Laat, Wouter; Wehrens, Xander H T; Rodney, George G; Martin, James F | Developmental cell. | 30773489 | 2019 Mar 25; |
| Tead1 is required for perinatal cardiomyocyte proliferation. | Liu, Ruya; Jagannathan, Rajaganapathi; Li, Feng; Lee, Jeongkyung; Balasubramanyam, Nikhil; Kim, Byung S; Yang, Ping; Yechoor, Vijay K; Moulik, Mousumi | PloS one. | 30811446 | 2019; |
| Ocular phenotypic consequences of a single copy deletion of the Yap1 gene (Yap1+/-) in mice. | Kim, Soohyun; Thomasy, Sara M; Raghunathan, Vijay Krishna; Teixeira, Leandro B C; Moshiri, Ala; FitzGerald, Paul; Murphy, Christopher J | Molecular vision. | 30820148 | 2019; |
| Cytohesin-3 is required for full insulin receptor signaling and controls body weight via lipid excretion. | Jux, Bettina; Gosejacob, Dominic; Tolksdorf, Felix; Mandel, Christa; Rieck, Michael; Namislo, Angrit; Pfeifer, Alexander; Kolanus, Waldemar | Scientific reports. | 30837656 | 2019 Mar 05; |
| Erratum: Author Correction: Identification of genes required for eye development by high-throughput screening of mouse knockouts. | Moore, Bret A; Leonard, Brian C; Sebbag, Lionel; Edwards, Sydney G; Cooper, Ann; Imai, Denise M; Straiton, Ewan; Santos, Luis; Reilly, Christopher; Griffey, Stephen M; Bower, Lynette; Clary, David; Mason, Jeremy; Roux, Michel J; Meziane, Hamid; Herault, Yann; International Mouse Phenotyping Consortium; McKerlie, Colin; Flenniken, Ann M; Nutter, Lauryl M J; Berberovic, Zorana; Owen, Celeste; Newbigging, Susan; Adissu, Hibret; Eskandarian, Mohammed; Hsu, Chih-Wei; Kalaga, Sowmya; Udensi, Uchechukwu; Asomugha, Chinwe; Bohat, Ritu; Gallegos, Juan J; Seavitt, John R; Heaney, Jason D; Beaudet, Arthur L; Dickinson, Mary E; Justice, Monica J; Philip, Vivek; Kumar, Vivek; Svenson, Karen L; Braun, Robert E; Wells, Sara; Cater, Heather; Stewart, Michelle; Clementson-Mobbs, Sharon; Joynson, Russell; Gao, Xiang; Suzuki, Tomohiro; Wakana, Shigeharu; Smedley, Damian; Seong, J K; Tocchini-Valentini, Glauco; Moore, Mark; Fletcher, Colin; Karp, Natasha; Ramirez-Solis, Ramiro; White, Jacqueline K; de Angelis, Martin Hrabe; Wurst, Wolfgang; Thomasy, Sara M; Flicek, Paul; Parkinson, Helen; Brown, Steve D M; Meehan, Terrence F; Nishina, Patsy M; Murray, Stephen A; Krebs, Mark P; Mallon, Ann-Marie; Kent Lloyd, K C; Murphy, Christopher J; Moshiri, Ala | Communications biology. | 30854487 | 2019; |
| Depletion of WNT10A Prevents Tumor Growth by Suppressing Microvessels and Collagen Expression. | Kumagai, Motona; Guo, Xin; Wang, Ke-Yong; Izumi, Hiroto; Tsukamoto, Manabu; Nakashima, Tamiji; Tasaki, Takashi; Kurose, Nozomu; Uramoto, Hidetaka; Sasaguri, Yasuyuki; Kohno, Kimitoshi; Yamada, Sohsuke | International journal of medical sciences. | 30911276 | 2019; |
| Integrative transcriptomic analysis suggests new autoregulatory splicing events coupled with nonsense-mediated mRNA decay. | Pervouchine, Dmitri; Popov, Yaroslav; Berry, Andy; Borsari, Beatrice; Frankish, Adam; Guigó, Roderic | Nucleic acids research. | 30916337 | 2019 Jun 04; |
| Robust mouse tracking in complex environments using neural networks. | Geuther, Brian Q; Deats, Sean P; Fox, Kai J; Murray, Steve A; Braun, Robert E; White, Jacqueline K; Chesler, Elissa J; Lutz, Cathleen M; Kumar, Vivek | Communications biology. | 30937403 | 2019; |
| Knockout of dihydrofolate reductase in mice induces hypertension and abdominal aortic aneurysm via mitochondrial dysfunction. | Li, Qiang; Youn, Ji Youn; Siu, Kin Lung; Murugesan, Priya; Zhang, Yixuan; Cai, Hua | Redox biology. | 30954686 | 2019 Jun; |
| PAD2-Mediated Citrullination Contributes to Efficient Oligodendrocyte Differentiation and Myelination. | Falcão, Ana Mendanha; Meijer, Mandy; Scaglione, Antonella; Rinwa, Puneet; Agirre, Eneritz; Liang, Jialiang; Larsen, Sara C; Heskol, Abeer; Frawley, Rebecca; Klingener, Michael; Varas-Godoy, Manuel; Raposo, Alexandre A S F; Ernfors, Patrik; Castro, Diogo S; Nielsen, Michael L; Casaccia, Patrizia; Castelo-Branco, Gonçalo | Cell reports. | 31018126 | 2019 Apr 23; |
| TMEM33 regulates intracellular calcium homeostasis in renal tubular epithelial cells. | Arhatte, Malika; Gunaratne, Gihan S; El Boustany, Charbel; Kuo, Ivana Y; Moro, Céline; Duprat, Fabrice; Plaisant, Magali; Duval, Hélène; Li, Dahui; Picard, Nicolas; Couvreux, Anais; Duranton, Christophe; Rubera, Isabelle; Pagnotta, Sophie; Lacas-Gervais, Sandra; Ehrlich, Barbara E; Marchant, Jonathan S; Savage, Aaron M; van Eeden, Fredericus J M; Wilkinson, Robert N; Demolombe, Sophie; Honoré, Eric; Patel, Amanda | Nature communications. | 31048699 | 2019 05 02; |
| The Hippo Pathway Blocks Mammalian Retinal Müller Glial Cell Reprogramming. | Rueda, Elda M; Hall, Benjamin M; Hill, Matthew C; Swinton, Paul G; Tong, Xuefei; Martin, James F; Poché, Ross A | Cell reports. | 31067451 | 2019 May 07; |
| =-Omics biomarker identification pipeline for translational medicine. | Bravo-Merodio, Laura; Williams, John A; Gkoutos, Georgios V; Acharjee, Animesh | Journal of translational medicine. | 31088492 | 2019 05 14; |
| A Comprehensive Plasma Metabolomics Dataset for a Cohort of Mouse Knockouts within the International Mouse Phenotyping Consortium. | Barupal, Dinesh K; Zhang, Ying; Shen, Tong; Fan, Sili; Roberts, Bryan S; Fitzgerald, Patrick; Wancewicz, Benjamin; Valdiviez, Luis; Wohlgemuth, Gert; Byram, Gregory; Choy, Ying Yng; Haffner, Bennett; Showalter, Megan R; Vaniya, Arpana; Bloszies, Clayton S; Folz, Jacob S; Kind, Tobias; Flenniken, Ann M; McKerlie, Colin; Nutter, Lauryl M J; Lloyd, Kent C; Fiehn, Oliver | Metabolites. | 31121816 | 2019 May 22; |
| New models for human disease from the International Mouse Phenotyping Consortium. | Cacheiro, Pilar; Haendel, Melissa A; Smedley, Damian; International Mouse Phenotyping Consortium and the Monarch Initiative | Mammalian genome : official journal of the International Mammalian Genome Society. | 31127358 | 2019 Jun; |
| Non-monotonic dose-response effects of arsenic on glucose metabolism. | Gong, Yingyun; Liu, Jidong; Xue, Yanfeng; Zhuang, Zhong; Qian, Sichong; Zhou, Wenjun; Li, Xin; Qian, Justin; Ding, Guolian; Sun, Zheng | Toxicology and applied pharmacology. | 31170414 | 2019 Aug 15; |
| Progressive myoclonic epilepsy-associated gene Kctd7 regulates retinal neurovascular patterning and function. | Alevy, Jonathan; Burger, Courtney A; Albrecht, Nicholas E; Jiang, Danye; Samuel, Melanie A | Neurochemistry international. | 31175897 | 2019 Oct; |
| High Resolution Imaging of Mouse Embryos and Neonates with X-Ray Micro-Computed Tomography. | Hsu, Chih-Wei; Kalaga, Sowmya; Akoma, Uchechukwu; Rasmussen, Tara L; Christiansen, Audrey E; Dickinson, Mary E | Current protocols in mouse biology. | 31195428 | 2019 Jun; |
| A cellular atlas of Pitx2-dependent cardiac development. | Hill, Matthew C; Kadow, Zachary A; Li, Lele; Tran, Tien T; Wythe, Joshua D; Martin, James F | Development (Cambridge, England). | 31201182 | 2019 Jun 14; |
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| Bmi1 Suppresses Adipogenesis in the Hematopoietic Stem Cell Niche. | Hu, Tianyuan; Kitano, Ayumi; Luu, Victor; Dawson, Brian; Hoegenauer, Kevin A; Lee, Brendan H; Nakada, Daisuke | Stem cell reports. | 31257132 | 2019 Sep 10; |
| S100a4-Cre-mediated deletion of Patched1 causes hypogonadotropic hypogonadism: role of pituitary hematopoietic cells in endocrine regulation. | Ren, Yi Athena; Monkkonen, Teresa; Lewis, Michael T; Bernard, Daniel J; Christian, Helen C; Jorgez, Carolina J; Moore, Joshua A; Landua, John D; Chin, Haelee M; Chen, Weiqin; Singh, Swarnima; Kim, Ik Sun; Zhang, Xiang Hf; Xia, Yan; Phillips, Kevin J; MacKay, Harry; Waterland, Robert A; Ljungberg, M Cecilia; Saha, Pradip K; Hartig, Sean M; Coll, Tatiana Fiordelisio; Richards, JoAnne S | JCI insight. | 31265437 | 2019 Jul 02; |
| Abcc5 Knockout Mice Have Lower Fat Mass and Increased Levels of Circulating GLP-1. | Cyranka, Malgorzata; Veprik, Anna; McKay, Eleanor J; van Loon, Nienke; Thijsse, Amber; Cotter, Luke; Hare, Nisha; Saibudeen, Affan; Lingam, Swathi; Pires, Elisabete; Larraufie, Pierre; Reimann, Frank; Gribble, Fiona; Stewart, Michelle; Bentley, Elizabeth; Lear, Pamela; McCullagh, James; Cantley, James; Cox, Roger D; de Wet, Heidi | Obesity (Silver Spring, Md.). | 31338999 | 2019 Aug; |
| Genome-wide screening of mouse knockouts reveals novel genes required for normal integumentary and oculocutaneous structure and function. | Moore, Bret A; Flenniken, Ann M; Clary, Dave; Moshiri, Ata S; Nutter, Lauryl M J; Berberovic, Zorana; Owen, Celeste; Newbigging, Susan; Adissu, Hibret; Eskandarian, Mohammad; McKerlie, Colin; International Mouse Phenotyping Consortium; Thomasy, Sara M; Lloyd, K C Kent; Murphy, Christopher J; Moshiri, Ala | Scientific reports. | 31371754 | 2019 Aug 01; |
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| Endurance exercise leads to beneficial molecular and physiological effects in a mouse model of myotonic dystrophy type 1. | Sharp, Lydia; Cox, Diana C; Cooper, Thomas A | Muscle & nerve. | 31509256 | 2019 12; |
| Genomic Mutation Identification in Mice Using Illumina Sequencing and Linux-Based Computational Methods. | Williams, John A; Powell, George; Mallon, Ann-Marie; Simon, Michelle M | Current protocols in mouse biology | 31532925 | 2019 Sep |
| Hippo pathway deletion in adult resting cardiac fibroblasts initiates a cell state transition with spontaneous and self-sustaining fibrosis. | Xiao, Yang; Hill, Matthew C; Li, Lele; Deshmukh, Vaibhav; Martin, Thomas J; Wang, Jun; Martin, James F | Genes & development. | 31558567 | 2019 11 01; |
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| Spatiotemporal gene expression patterns reveal molecular relatedness between retinal laminae. | Jiang, Danye; Burger, Courtney A; Casasent, Anna K; Albrecht, Nicholas E; Li, Fenge; Samuel, Melanie A | The Journal of comparative neurology. | 31609468 | 2020 Apr 01; |
| Cytoglobin deficiency potentiates Crb1-mediated retinal degeneration in rd8 mice. | Kwon, Young Sam; Tham, Addy; Lopez, Antonio Jacobo; Edwards, Sydney; Woods, Sean; Chen, Jiajia; Wong-Fortunato, Jenna; Quiroz Alonso, Alejandra; Javier, Seanne; Au, Ingrid; Clarke, Maria; Humpal, Devin; Lloyd, K C Kent; Thomasy, Sara; Murphy, Christopher; Glaser, Thomas M; Moshiri, Ala | Developmental biology. | 31634437 | 2020 Feb 15; |
| Long-range Pitx2c enhancer-promoter interactions prevent predisposition to atrial fibrillation. | Zhang, Min; Hill, Matthew C; Kadow, Zachary A; Suh, Ji Ho; Tucker, Nathan R; Hall, Amelia W; Tran, Tien T; Swinton, Paul S; Leach, John P; Margulies, Kenneth B; Ellinor, Patrick T; Li, Na; Martin, James F | Proceedings of the National Academy of Sciences of the United States of America. | 31636200 | 2019 11 05; |
| Effector gene expression underlying neuron subtype-specific traits in the Motor Ganglion of Ciona. | Gibboney, Susanne; Orvis, Jameson; Kim, Kwantae; Johnson, Christopher J; Martinez-Feduchi, Paula; Lowe, Elijah K; Sharma, Sarthak; Stolfi, Alberto | Developmental biology. | 31639337 | 2020 Feb 01; |
| Improved Biomarker and Imaging Analysis for Characterizing Progressive Cardiac Fibrosis in a Mouse Model of Chronic Chagasic Cardiomyopathy. | Hoffman, Kristyn A; Reynolds, Corey; Bottazzi, Maria Elena; Hotez, Peter; Jones, Kathryn | Journal of the American Heart Association. | 31718442 | 2019 11 19; |
| NIX-Mediated Mitophagy Promotes Effector Memory Formation in Antigen-Specific CD8+ T Cells. | Gupta, Shubhranshu S; Sharp, Robert; Hofferek, Colby; Kuai, Le; Dorn 2nd, Gerald W; Wang, Jin; Chen, Min | Cell reports. | 31722203 | 2019 11 12; |
| High-throughput phenotyping reveals expansive genetic and structural underpinnings of immune variation. | Abeler-Dörner, Lucie; Laing, Adam G; Lorenc, Anna; Ushakov, Dmitry S; Clare, Simon; Speak, Anneliese O; Duque-Correa, Maria A; White, Jacqueline K; Ramirez-Solis, Ramiro; Saran, Namita; Bull, Katherine R; Morón, Belén; Iwasaki, Jua; Barton, Philippa R; Caetano, Susana; Hng, Keng I; Cambridge, Emma; Forman, Simon; Crockford, Tanya L; Griffiths, Mark; Kane, Leanne; Harcourt, Katherine; Brandt, Cordelia; Notley, George; Babalola, Kolawole O; Warren, Jonathan; Mason, Jeremy C; Meeniga, Amrutha; Karp, Natasha A; Melvin, David; Cawthorne, Eleanor; Weinrick, Brian; Rahim, Albina; Drissler, Sibyl; Meskas, Justin; Yue, Alice; Lux, Markus; Song-Zhao, George X; Chan, Anna; Ballesteros Reviriego, Carmen; Abeler, Johannes; Wilson, Heather; Przemska-Kosicka, Agnieszka; Edmans, Matthew; Strevens, Natasha; Pasztorek, Markus; Meehan, Terrence F; Powrie, Fiona; Brinkman, Ryan; Dougan, Gordon; Jacobs Jr, William; Lloyd, Clare M; Cornall, Richard J; Maloy, Kevin J; Grencis, Richard K; Griffiths, Gillian M; Adams, David J; Hayday, Adrian C | Nature immunology. | 31844327 | 2020 01; |
| Atovaquone is active against AML by upregulating the integrated stress pathway and suppressing oxidative phosphorylation. | Stevens, Alexandra M; Xiang, Michael; Heppler, Lisa N; To?i?, Isidora; Jiang, Kevin; Munoz, Jaime O; Gaikwad, Amos S; Horton, Terzah M; Long, Xin; Narayanan, Padmini; Seashore, Elizabeth L; Terrell, Maci C; Rashid, Raushan; Krueger, Michael J; Mangubat-Medina, Alicia E; Ball, Zachary T; Sumazin, Pavel; Walker, Sarah R; Hamada, Yoshimasa; Oyadomari, Seiichi; Redell, Michele S; Frank, David A | Blood advances. | 31856268 | 2019 12 23; |
| Metabolic dysregulation in the Atp7b-/- Wilson's disease mouse model. | Wooton-Kee, Clavia Ruth; Robertson, Matthew; Zhou, Ying; Dong, Bingning; Sun, Zhen; Kim, Kang Ho; Liu, Hailan; Xu, Yong; Putluri, Nagireddy; Saha, Pradip; Coarfa, Cristian; Moore, David D; Nuotio-Antar, Alli M | Proceedings of the National Academy of Sciences of the United States of America. | 31924743 | 2020 Jan 28; |
| High-throughput discovery of genetic determinants of circadian misalignment. | Zhang, Tao; Xie, Pancheng; Dong, Yingying; Liu, Zhiwei; Zhou, Fei; Pan, Dejing; Huang, Zhengyun; Zhai, Qiaocheng; Gu, Yue; Wu, Qingyu; Tanaka, Nobuhiko; Obata, Yuichi; Bradley, Allan; Lelliott, Christopher J; Sanger Institute Mouse Genetics Project; Nutter, Lauryl M J; McKerlie, Colin; Flenniken, Ann M; Champy, Marie-France; Sorg, Tania; Herault, Yann; Angelis, Martin Hrabe De; Durner, Valerie Gailus; Mallon, Ann-Marie; Brown, Steve D M; Meehan, Terry; Parkinson, Helen E; Smedley, Damian; Lloyd, K C Kent; Yan, Jun; Gao, Xiang; Seong, Je Kyung; Wang, Chi-Kuang Leo; Sedlacek, Radislav; Liu, Yi; Rozman, Jan; Yang, Ling; Xu, Ying | PLoS genetics. | 31929527 | 2020 01; |
| Fam151b, the mouse homologue of C.elegans menorin gene, is essential for retinal function. | Findlay, Amy S; McKie, Lisa; Keighren, Margaret; Clementson-Mobbs, Sharon; Sanchez-Pulido, Luis; Wells, Sara; Cross, Sally H; Jackson, Ian J | Scientific reports. | 31949211 | 2020 Jan 16; |
| Incremental data integration for tracking genotype-disease associations. | Konopka, Tomasz; Smedley, Damian | PLoS computational biology. | 31986132 | 2020 01; |
| PIK3CA variants selectively initiate brain hyperactivity during gliomagenesis. | Yu, Kwanha; Lin, Chia-Ching John; Hatcher, Asante; Lozzi, Brittney; Kong, Kathleen; Huang-Hobbs, Emmet; Cheng, Yi-Ting; Beechar, Vivek B; Zhu, Wenyi; Zhang, Yiqun; Chen, Fengju; Mills, Gordon B; Mohila, Carrie A; Creighton, Chad J; Noebels, Jeffrey L; Scott, Kenneth L; Deneen, Benjamin | Nature. | 31996845 | 2020 02; |
| Human and mouse essentiality screens as a resource for disease gene discovery. | Cacheiro, Pilar; Muñoz-Fuentes, Violeta; Murray, Stephen A; Dickinson, Mary E; Bucan, Maja; Nutter, Lauryl M J; Peterson, Kevin A; Haselimashhadi, Hamed; Flenniken, Ann M; Morgan, Hugh; Westerberg, Henrik; Konopka, Tomasz; Hsu, Chih-Wei; Christiansen, Audrey; Lanza, Denise G; Beaudet, Arthur L; Heaney, Jason D; Fuchs, Helmut; Gailus-Durner, Valerie; Sorg, Tania; Prochazka, Jan; Novosadova, Vendula; Lelliott, Christopher J; Wardle-Jones, Hannah; Wells, Sara; Teboul, Lydia; Cater, Heather; Stewart, Michelle; Hough, Tertius; Wurst, Wolfgang; Sedlacek, Radislav; Adams, David J; Seavitt, John R; Tocchini-Valentini, Glauco; Mammano, Fabio; Braun, Robert E; McKerlie, Colin; Herault, Yann; de Angelis, Martin Hrab?; Mallon, Ann-Marie; Lloyd, K C Kent; Brown, Steve D M; Parkinson, Helen; Meehan, Terrence F; Smedley, Damian; Genomics England Research Consortium; International Mouse Phenotyping Consortium | Nature communications. | 32005800 | 2020 Jan 31; |
| The Deep Genome Project. | Lloyd, K C Kent; Adams, David J; Baynam, Gareth; Beaudet, Arthur L; Bosch, Fatima; Boycott, Kym M; Braun, Robert E; Caulfield, Mark; Cohn, Ronald; Dickinson, Mary E; Dobbie, Michael S; Flenniken, Ann M; Flicek, Paul; Galande, Sanjeev; Gao, Xiang; Grobler, Anne; Heaney, Jason D; Herault, Yann; de Angelis, Martin Hrab?; Lupski, James R; Lyonnet, Stanislas; Mallon, Ann-Marie; Mammano, Fabio; MacRae, Calum A; McInnes, Roderick; McKerlie, Colin; Meehan, Terrence F; Murray, Stephen A; Nutter, Lauryl M J; Obata, Yuichi; Parkinson, Helen; Pepper, Michael S; Sedlacek, Radislav; Seong, Je Kyung; Shiroishi, Toshihiko; Smedley, Damian; Tocchini-Valentini, Glauco; Valle, David; Wang, Chi-Kuang Leo; Wells, Sara; White, Jacqueline; Wurst, Wolfgang; Xu, Ying; Brown, Steve D M | Genome biology. | 32008577 | 2020 02 03; |
| A comprehensive and comparative phenotypic analysis of the collaborative founder strains identifies new and known phenotypes. | Kollmus, Heike; Fuchs, Helmut; Lengger, Christoph; Haselimashhadi, Hamed; Bogue, Molly A; Östereicher, Manuela A; Horsch, Marion; Adler, Thure; Aguilar-Pimentel, Juan Antonio; Amarie, Oana Veronica; Becker, Lore; Beckers, Johannes; Calzada-Wack, Julia; Garrett, Lillian; Hans, Wolfgang; Hölter, Sabine M; Klein-Rodewald, Tanja; Maier, Holger; Mayer-Kuckuk, Philipp; Miller, Gregor; Moreth, Kristin; Neff, Frauke; Rathkolb, Birgit; Rácz, Ildikó; Rozman, Jan; Spielmann, Nadine; Treise, Irina; Busch, Dirk; Graw, Jochen; Klopstock, Thomas; Wolf, Eckhard; Wurst, Wolfgang; Yildirim, Ali Önder; Mason, Jeremy; Torres, Arturo; Mouse Phenome Database Team; Balling, Rudi; Mehaan, Terry; Gailus-Durner, Valerie; Schughart, Klaus; Hrab? de Angelis, Martin | Mammalian genome : official journal of the International Mammalian Genome Society. | 32060626 | 2020 02; |
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| Adrenomedullin Is Necessary to Resolve Hyperoxia-Induced Experimental Bronchopulmonary Dysplasia and Pulmonary Hypertension in Mice. | Menon, Renuka T; Shrestha, Amrit Kumar; Reynolds, Corey L; Barrios, Roberto; Caron, Kathleen M; Shivanna, Binoy | The American journal of pathology. | 32093901 | 2020 03; |
| Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development. | Ngan, Chew Yee; Wong, Chee Hong; Tjong, Harianto; Wang, Wenbo; Goldfeder, Rachel L; Choi, Cindy; He, Hao; Gong, Liang; Lin, Junyan; Urban, Barbara; Chow, Julianna; Li, Meihong; Lim, Joanne; Philip, Vivek; Murray, Stephen A; Wang, Haoyi; Wei, Chia-Lin | Nature genetics. | 32094912 | 2020 03; |
| DNA fragmentation index (DFI) as a measure of sperm quality and fertility in mice. | Li, Ming-Wen; Lloyd, K C Kent | Scientific reports. | 32123279 | 2020 Mar 02; |
| Tie-2 Cre-Mediated Deficiency of Extracellular Signal-Regulated Kinase 2 Potentiates Experimental Bronchopulmonary Dysplasia-Associated Pulmonary Hypertension in Neonatal Mice. | Menon, Renuka T; Shrestha, Amrit Kumar; Barrios, Roberto; Reynolds, Corey; Shivanna, Binoy | International journal of molecular sciences. | 32244398 | 2020 Mar 31; |
| Region-Specific Transcriptional Control of Astrocyte Function Oversees Local Circuit Activities. | Huang, Anna Yu-Szu; Woo, Junsung; Sardar, Debosmita; Lozzi, Brittney; Bosquez Huerta, Navish A; Lin, Chia-Ching John; Felice, Daniela; Jain, Antrix; Paulucci-Holthauzen, Adriana; Deneen, Benjamin | Neuron. | 32320644 | 2020 06 17; |
| A global Slc7a7 knockout mouse model demonstrates characteristic phenotypes of human lysinuric protein intolerance. | Stroup, Bridget M; Marom, Ronit; Li, Xiaohui; Hsu, Chih-Wei; Chang, Cheng-Yen; Truong, Luan D; Dawson, Brian; Grafe, Ingo; Chen, Yuqing; Jiang, Ming-Ming; Lanza, Denise; Green, Jennie Rose; Sun, Qin; Barrish, J P; Ani, Safa; Christiansen, Audrey E; Seavitt, John R; Dickinson, Mary E; Kheradmand, Farrah; Heaney, Jason D; Lee, Brendan; Burrage, Lindsay C | Human molecular genetics | 32504080 | 2020 Aug 03 |
| The occurrence of tarsal injuries in male mice of C57BL/6N substrains in multiple international mouse facilities. | Herbert, Eleanor; Stewart, Michelle; Hutchison, Marie; Flenniken, Ann M; Qu, Dawei; Nutter, Lauryl M J; McKerlie, Colin; Hobson, Liane; Kick, Brenda; Lyons, Bonnie; Wiegand, Jean-Paul; Doty, Rosalinda; Aguilar-Pimentel, Juan Antonio; Hrabe de Angelis, Martin; Dickinson, Mary; Seavitt, John; White, Jacqueline K; Scudamore, Cheryl L; Wells, Sara | PloS one. | 32542000 | 2020; |
| Somatic Gain of KRAS Function in the Endothelium is Sufficient to Cause Vascular Malformations that Require MEK but not PI3K Signaling. | Fish, Jason E; Flores-Suarez, Carlos Perfecto; Boudreau, Emilie; Herman, Alexander M; Gutierrez, Manuel Cantu; Gustafson, Dakota; DiStefano, Peter V; Cui, Meng; Chen, Zhiqi; Berman De Ruiz, Karen; Schexnayder, Taylor S; Ward, Christopher S; Radovanovic, Ivan; Wythe, Joshua D | Circulation research. | 32552404 | 2020 Jun 17; |
| Universal Southern blot protocol with cold or radioactive probes for the validation of alleles obtained by homologous recombination. | Codner, Gemma F; Erbs, Valerie; Loeffler, Jorik; Chessum, Lauren; Caulder, Adam; Jullien, Nicolas; Wells, Sara; Birling, Marie-Christine; Teboul, Lydia | Methods (San Diego, Calif.) | 32599056 | 2021 07 |
| ADAD1 and ADAD2, testis-specific adenosine deaminase domain-containing proteins, are required for male fertility. | Snyder, Elizabeth; Chukrallah, Lauren; Seltzer, Kelly; Goodwin, Leslie; Braun, Robert E | Scientific reports. | 32665638 | 2020 Jul 14; |
| Profound and redundant functions of arcuate neurons in obesity development. | Zhu, Canjun; Jiang, Zhiying; Xu, Yuanzhong; Cai, Zhao-Lin; Jiang, Qingyan; Xu, Yong; Xue, Mingshan; Arenkiel, Benjamin R; Wu, Qi; Shu, Gang; Tong, Qingchun | Nature metabolism. | 32719538 | 2020 08; |
| Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin. | Ong, Seow Theng; Bajaj, Saumya; Tanner, Mark R; Chang, Shih Chieh; Krishnarjuna, Bankala; Ng, Xuan Rui; Morales, Rodrigo A V; Chen, Ming Wei; Luo, Dahai; Patel, Dharmeshkumar; Yasmin, Sabina; Ng, Jeremy Jun Heng; Zhuang, Zhong; Nguyen, Hai M; El Sahili, Abbas; Lescar, Julien; Patil, Rahul; Charman, Susan A; Robins, Edward G; Goggi, Julian L; Tan, Peng Wen; Sadasivam, Pragalath; Ramasamy, Boominathan; Hartimath, Siddana V; Dhawan, Vikas; Bednenko, Janna; Colussi, Paul; Wulff, Heike; Pennington, Michael W; Kuyucak, Serdar; Norton, Raymond S; Beeton, Christine; Chandy, K George | ACS pharmacology & translational science. | 32832873 | 2020 Aug 14; |
| Interactive and independent effects of early lipopolysaccharide and hyperoxia exposure on developing murine lungs. | Shrestha, Amrit Kumar; Menon, Renuka T; El-Saie, Ahmed; Barrios, Roberto; Reynolds, Corey; Shivanna, Binoy | American journal of physiology. Lung cellular and molecular physiology | 32901520 | 2020 12 01 |
| Identification of a Core Module for Bone Mineral Density through the Integration of a Co-expression Network and GWAS Data. | Sabik, Olivia L; Calabrese, Gina M; Taleghani, Eric; Ackert-Bicknell, Cheryl L; Farber, Charles R | Cell reports | 32937138 | 2020 09 15 |
| Machine learning-based automated phenotyping of inflammatory nocifensive behavior in mice. | Wotton, Janine M; Peterson, Emma; Anderson, Laura; Murray, Stephen A; Braun, Robert E; Chesler, Elissa J; White, Jacqueline K; Kumar, Vivek | Molecular pain. | 32955381 | 2020 Jan-Dec; |
| Anticipating and Identifying Collateral Damage in Genome Editing. | Burgio, Gaëtan; Teboul, Lydia | Trends in genetics : TIG. | 33039248 | 2020 Dec; |
| Antioxidant Carbon Nanoparticles Inhibit Fibroblast-Like Synoviocyte Invasiveness and Reduce Disease Severity in a Rat Model of Rheumatoid Arthritis. | Tanner, Mark R; Huq, Redwan; Sikkema, William K A; Nilewski, Lizanne G; Yosef, Nejla; Schmitt, Cody; Flores-Suarez, Carlos P; Raugh, Arielle; Laragione, Teresina; Gulko, Pércio S; Tour, James M; Beeton, Christine | Antioxidants (Basel, Switzerland) | 33081234 | 2020 Oct 16 |
| A holistic view of mouse enhancer architectures reveals analogous pleiotropic effects and correlation with human disease. | Sethi, Siddharth; Vorontsov, Ilya E; Kulakovskiy, Ivan V; Greenaway, Simon; Williams, John; Makeev, Vsevolod J; Brown, Steve D M; Simon, Michelle M; Mallon, Ann-Marie | BMC genomics. | 33138777 | 2020 Nov 02; |
| Aurora B and C kinases regulate chromosome desynapsis and segregation during mouse and human spermatogenesis. | Wellard, Stephen R; Schindler, Karen; Jordan, Philip W | Journal of cell science | 33172986 | 2020 12 04 |
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| Snx3 is important for mammalian neural tube closure via its role in canonical and non-canonical WNT signaling. | Brown, Heather Mary; Murray, Stephen A; Northrup, Hope; Au, Kit Sing; Niswander, Lee A | Development (Cambridge, England) | 33214242 | 2020 11 19 |
| Cage-lid hanging behavior as a translationally relevant measure of pain in mice. | Zhang, Hantao; Lecker, Irene; Collymore, Chereen; Dokova, Anastassia; Pham, Maian Christine; Rosen, Sarah F; Crawhall-Duk, Hayley; Zain, Maham; Valencia, Megan; Filippini, Helena Fetter; Li, Jerry; D'Souza, Abigail J; Cho, Chulmin; Michailidis, Vassilia; Whissell, Paul D; Patel, Ingita; Steenland, Hendrik W; Virginia Lee, Wai-Jane; Moayedi, Massieh; Sterley, Toni-Lee; Bains, Jaideep S; Stratton, Jo Anne; Matyas, John R; Biernaskie, Jeff; Dubins, David; Vukobradovic, Igor; Bezginov, Alexandr; Flenniken, Ann M; Martin, Loren J; Mogil, Jeffrey S; Bonin, Robert P | Pain | 33230005 | 2021 05 01 |
| Detection of CRISPR-mediated genome modifications through altered methylation patterns of CpG islands. | Farris, M Heath; Texter, Pamela A; Mora, Agustin A; Wiles, Michael V; Mac Garrigle, Ellen F; Klaus, Sybil A; Rosfjord, Kristine | BMC genomics | 33267773 | 2020 Dec 02 |
| XBP1 links the 12-hour clock to NAFLD and regulation of membrane fluidity and lipid homeostasis. | Meng, Huan; Gonzales, Naomi M; Lonard, David M; Putluri, Nagireddy; Zhu, Bokai; Dacso, Clifford C; York, Brian; O'Malley, Bert W | Nature communications. | 33277471 | 2020 12 04; |
| Vertical transmission of a large calvarial ossification defect due to heterozygous variants of ALX4 and TWIST1. | Walters, Michelle E; Lacassie, Yves; Azamian, Mahshid; Franciskovich, Rachel; Zapata, Gladys; Hernandez, Patricia P; Liu, Pengfei; Campbell, Ian M; Bostwick, Bret L; Lalani, Seema R | American journal of medical genetics. Part A | 33369125 | 2021 Mar |
| Mouse mutant phenotyping at scale reveals novel genes controlling bone mineral density. | Swan, Anna L; Schütt, Christine; Rozman, Jan; Del Mar Muñiz Moreno, Maria; Brandmaier, Stefan; Simon, Michelle; Leuchtenberger, Stefanie; Griffiths, Mark; Brommage, Robert; Keskivali-Bond, Piia; Grallert, Harald; Werner, Thomas; Teperino, Raffaele; Becker, Lore; Miller, Gregor; Moshiri, Ala; Seavitt, John R; Cissell, Derek D; Meehan, Terrence F; Acar, Elif F; Lelliott, Christopher J; Flenniken, Ann M; Champy, Marie-France; Sorg, Tania; Ayadi, Abdel; Braun, Robert E; Cater, Heather; Dickinson, Mary E; Flicek, Paul; Gallegos, Juan; Ghirardello, Elena J; Heaney, Jason D; Jacquot, Sylvie; Lally, Connor; Logan, John G; Teboul, Lydia; Mason, Jeremy; Spielmann, Nadine; McKerlie, Colin; Murray, Stephen A; Nutter, Lauryl M J; Odfalk, Kristian F; Parkinson, Helen; Prochazka, Jan; Reynolds, Corey L; Selloum, Mohammed; Spoutil, Frantisek; Svenson, Karen L; Vales, Taylor S; Wells, Sara E; White, Jacqueline K; Sedlacek, Radislav; Wurst, Wolfgang; Lloyd, K C Kent; Croucher, Peter I; Fuchs, Helmut; Williams, Graham R; Bassett, J H Duncan; Gailus-Durner, Valerie; Herault, Yann; Mallon, Ann-Marie; Brown, Steve D M; Mayer-Kuckuk, Philipp; Hrabe de Angelis, Martin; IMPC Consortium | PLoS genetics | 33370286 | 2020 Dec |
| Nitric oxide modulates bone anabolism through regulation of osteoblast glycolysis and differentiation. | Jin, Zixue; Kho, Jordan; Dawson, Brian; Jiang, Ming-Ming; Chen, Yuqing; Ali, Saima; Burrage, Lindsay C; Grover, Monica; Palmer, Donna J; Turner, Dustin L; Ng, Philip; Nagamani, Sandesh Cs; Lee, Brendan | The Journal of clinical investigation | 33373331 | 2021 Mar 01 |
| OpenStats: A robust and scalable software package for reproducible analysis of high-throughput phenotypic data. | Haselimashhadi, Hamed; Mason, Jeremy C; Mallon, Ann-Marie; Smedley, Damian; Meehan, Terrence F; Parkinson, Helen | PloS one | 33378393 | 2020 |
| Reversible cardiac disease features in an inducible CUG repeat RNA-expressing mouse model of myotonic dystrophy. | Rao, Ashish N; Campbell, Hannah M; Guan, Xiangnan; Word, Tarah A; Wehrens, Xander Ht; Xia, Zheng; Cooper, Thomas A | JCI insight | 33497365 | 2021 Mar 08 |
| LAMA: automated image analysis for the developmental phenotyping of mouse embryos. | Horner, Neil R; Venkataraman, Shanmugasundaram; Armit, Chris; Casero, Ramón; Brown, James M; Wong, Michael D; van Eede, Matthijs C; Henkelman, R Mark; Johnson, Sara; Teboul, Lydia; Wells, Sara; Brown, Steve D; Westerberg, Henrik; Mallon, Ann-Marie | Development (Cambridge, England) | 33574040 | 2021 03 24 |
| Overlapping roles for PLK1 and Aurora A during meiotic centrosome biogenesis in mouse spermatocytes. | Wellard, Stephen R; Zhang, Yujiao; Shults, Chris; Zhao, Xueqi; McKay, Matthew; Murray, Stephen A; Jordan, Philip W | EMBO reports | 33615678 | 2021 Apr 07 |
| Genetic analysis of Pycr1 and Pycr2 in mice. | Stum, Morgane G; Tadenev, Abigail L D; Seburn, Kevin L; Miers, Kathy E; Poon, Pak P; McMaster, Christopher R; Robinson, Carolyn; Kane, Coleen; Silva, Kathleen A; Cliften, Paul F; Sundberg, John P; Reinholdt, Laura G; John, Simon W M; Burgess, Robert W | Genetics | 33734376 | 2021 May 17 |
| REV-ERB in GABAergic neurons controls diurnal hepatic insulin sensitivity. | Ding, Guolian; Li, Xin; Hou, Xinguo; Zhou, Wenjun; Gong, Yingyun; Liu, Fuqiang; He, Yanlin; Song, Jia; Wang, Jing; Basil, Paul; Li, Wenbo; Qian, Sichong; Saha, Pradip; Wang, Jinbang; Cui, Chen; Yang, Tingting; Zou, Kexin; Han, Younghun; Amos, Christopher I; Xu, Yong; Chen, Li; Sun, Zheng | Nature | 33762728 | 2021 Apr |
| Loss of bone morphogenetic protein-binding endothelial regulator causes insulin resistance. | Mao, Hua; Li, Luge; Fan, Qiying; Angelini, Aude; Saha, Pradip K; Wu, Huaizhu; Ballantyne, Christie M; Hartig, Sean M; Xie, Liang; Pi, Xinchun | Nature communications | 33772019 | 2021 03 26 |
| A resource of targeted mutant mouse lines for 5,061 genes. | Birling, Marie-Christine; Yoshiki, Atsushi; Adams, David J; Ayabe, Shinya; Beaudet, Arthur L; Bottomley, Joanna; Bradley, Allan; Brown, Steve D M; Bürger, Antje; Bushell, Wendy; Chiani, Francesco; Chin, Hsian-Jean Genie; Christou, Skevoulla; Codner, Gemma F; DeMayo, Francesco J; Dickinson, Mary E; Doe, Brendan; Donahue, Leah Rae; Fray, Martin D; Gambadoro, Alessia; Gao, Xiang; Gertsenstein, Marina; Gomez-Segura, Alba; Goodwin, Leslie O; Heaney, Jason D; Hérault, Yann; de Angelis, Martin Hrabe; Jiang, Si-Tse; Justice, Monica J; Kasparek, Petr; King, Ruairidh E; Kühn, Ralf; Lee, Ho; Lee, Young Jae; Liu, Zhiwei; Lloyd, K C Kent; Lorenzo, Isabel; Mallon, Ann-Marie; McKerlie, Colin; Meehan, Terrence F; Fuentes, Violeta Munoz; Newman, Stuart; Nutter, Lauryl M J; Oh, Goo Taeg; Pavlovic, Guillaume; Ramirez-Solis, Ramiro; Rosen, Barry; Ryder, Edward J; Santos, Luis A; Schick, Joel; Seavitt, John R; Sedlacek, Radislav; Seisenberger, Claudia; Seong, Je Kyung; Skarnes, William C; Sorg, Tania; Steel, Karen P; Tamura, Masaru; Tocchini-Valentini, Glauco P; Wang, Chi-Kuang Leo; Wardle-Jones, Hannah; Wattenhofer-Donzé, Marie; Wells, Sara; Wiles, Michael V; Willis, Brandon J; Wood, Joshua A; Wurst, Wolfgang; Xu, Ying; International Mouse Phenotyping Consortium (IMPC); Teboul, Lydia; Murray, Stephen A | Nature genetics | 33833456 | 2021 04 |
| Alterations to the Cardiac Metabolome Induced by Chronic T. cruzi Infection Relate to the Degree of Cardiac Pathology. | Hoffman, Kristyn; Liu, Zongyuan; Hossain, Ekram; Bottazzi, Maria Elena; Hotez, Peter J; Jones, Kathryn M; McCall, Laura-Isobel | ACS infectious diseases | 33843195 | 2021 06 11 |
| Inter- and Transgenerational Effects of Paternal Exposure to Inorganic Arsenic. | Gong, Yingyun; Xue, Yanfeng; Li, Xin; Zhang, Zhao; Zhou, Wenjun; Marcolongo, Paola; Benedetti, Angiolo; Mao, Shengyong; Han, Leng; Ding, Guolian; Sun, Zheng | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 33854880 | 2021 04 |
| Rap1 in the VMH regulates glucose homeostasis. | Kaneko, Kentaro; Lin, Hsiao-Yun; Fu, Yukiko; Saha, Pradip K; De la Puente-Gomez, Ana B; Xu, Yong; Ohinata, Kousaku; Chen, Peter; Morozov, Alexei; Fukuda, Makoto | JCI insight | 33974562 | 2021 Jun 08 |
| REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology. | Sarkans, Ugis; Chiu, Wah; Collinson, Lucy; Darrow, Michele C; Ellenberg, Jan; Grunwald, David; Hériché, Jean-Karim; Iudin, Andrii; Martins, Gabriel G; Meehan, Terry; Narayan, Kedar; Patwardhan, Ardan; Russell, Matthew Robert Geoffrey; Saibil, Helen R; Str | Nature methods | 34021280 | 2021 May 21 |
| Proteotyping of knockout mouse strains reveals sex- and strain-specific signatures in blood plasma. | Mohammed, Yassene; Michaud, Sarah A; Pětrošová, Helena; Yang, Juncong; Ganguly, Milan; Schibli, David; Flenniken, Ann M; Nutter, Lauryl M J; Adissu, Hibret A; Lloyd, K C Kent; McKerlie, Colin; Borchers, Christoph H | NPJ systems biology and applications | 34050187 | 2021 May 28 |
| A rare description of pure partial trisomy of 16q12.2q24.3 and review of the literature. | Manor, Joshua; Dinu, Daniela; Azamian, Mahshid S; Bi, Weimin; Darilek, Sandra; Lalani, Seema R | American journal of medical genetics. Part A | 34061437 | 2021 Jun 01 |
| Screening and validation of genome-edited animals. | Bunton-Stasyshyn, Rosie K; Codner, Gemma F; Teboul, Lydia | Laboratory animals | 34192966 | 2022 Feb |
| TTI-101: A competitive inhibitor of STAT3 that spares oxidative phosphorylation and reverses mechanical allodynia in mouse models of neuropathic pain. | Kasembeli, Moses M; Singhmar, Pooja; Ma, Jiacheng; Edralin, Jules; Tang, Yongfu; Adams 3rd, Clydell; Heijnen, Cobi J; Kavelaars, Annemieke; Tweardy, David J | Biochemical pharmacology | 34274354 | 2021 Oct |
| Diffusion enables integration of heterogeneous data and user-driven learning in a desktop knowledge-base. | Konopka, Tomasz; Ng, Sandra; Smedley, Damian | PLoS computational biology | 34379637 | 2021 Aug |
| Systematic profiling of DNMT3A variants reveals protein instability mediated by the DCAF8 E3 ubiquitin ligase adaptor. | Huang, Yung-Hsin; Chen, Chun-Wei; Sundaramurthy, Venkatasubramaniam; Slabicki, Mikolaj; Hao, Dapeng; Watson, Caroline J; Tovy, Ayala; Reyes, Jaime M; Dakhova, Olga; Crovetti, Brielle R; Galonska, Christina; Lee, Minjung; Brunetti, Lorenzo; Zhou, Yubin; Tatton-Brown, Katrina; Huang, Yun; Cheng, Xiaodong; Meissner, Alexander; Valk, Peter J M; Van Maldergem, Lionel; Sanders, Mathijs A; Blundell, Jamie R; Li, Wei; Ebert, Benjamin L; Goodell, Margaret A | Cancer discovery | 34429321 | 2021 Aug 24 |
| COPB2 loss of function causes a coatopathy with osteoporosis and developmental delay. | Marom, Ronit; Burrage, Lindsay C; Venditti, Rossella; Clément, Aurélie; Blanco-Sánchez, Bernardo; Jain, Mahim; Scott, Daryl A; Rosenfeld, Jill A; Sutton, V Reid; Shinawi, Marwan; Mirzaa, Ghayda; DeVile, Catherine; Roberts, Rowenna; Calder, Alistair D; Allgrove, Jeremy; Grafe, Ingo; Lanza, Denise G; Li, Xiaohui; Joeng, Kyu Sang; Lee, Yi-Chien; Song, I-Wen; Sliepka, Joseph M; Batkovskyte, Dominyka; Washington, Megan; Dawson, Brian C; Jin, Zixue; Jiang, Ming-Ming; Chen, Shan; Chen, Yuqing; Tran, Alyssa A; Emrick, Lisa T; Murdock, David R; Hanchard, Neil A; Zapata, Gladys E; Mehta, Nitesh R; Weis, Mary Ann; Scott, Abbey A; Tremp, Brenna A; Phillips, Jennifer B; Wegner, Jeremy; Taylor-Miller, Tashunka; Gibbs, Richard A; Muzny, Donna M; Jhangiani, Shalini N; Hicks, John; Stottmann, Rolf W; Dickinson, Mary E; Seavitt, John R; Heaney, Jason D; Eyre, David R; Undiagnosed Diseases Network; Westerfield, Monte; De Matteis, Maria Antonietta; Lee, Brendan | American journal of human genetics | 34450031 | 2021 09 02 |
| A computational approach for identification of core modules from a co-expression network and GWAS data. | Sabik, Olivia L; Ackert-Bicknell, Cheryl L; Farber, Charles R | STAR protocols | 34467232 | 2021 Sep 17 |
| Comprehensive phenotypic analysis of the Dp1Tyb mouse strain reveals a broad range of Down syndrome-related phenotypes. | Lana-Elola, Eva; Cater, Heather; Watson-Scales, Sheona; Greenaway, Simon; Müller-Winkler, Jennifer; Gibbins, Dorota; Nemes, Mihaela; Slender, Amy; Hough, Tertius; Keskivali-Bond, Piia; Scudamore, Cheryl L; Herbert, Eleanor; Banks, Gareth T; Mobbs, Helene; Canonica, Tara; Tosh, Justin; Noy, Suzanna; Llorian, Miriam; Nolan, Patrick M; Griffin, Julian L; Good, Mark; Simon, Michelle; Mallon, Ann-Marie; Wells, Sara; Fisher, Elizabeth M C; Tybulewicz, Victor L J | Disease models & mechanisms | 34477842 | 2021 Oct 01 |
| Endothelium-specific depletion of LRP1 improves glucose homeostasis through inducing osteocalcin. | Mao, Hua; Li, Luge; Fan, Qiying; Angelini, Aude; Saha, Pradip K; Coarfa, Cristian; Rajapakshe, Kimal; Perera, Dimuthu; Cheng, Jizhong; Wu, Huaizhu; Ballantyne, Christie M; Sun, Zheng; Xie, Liang; Pi, Xinchun | Nature communications | 34489478 | 2021 09 06 |
| Signal Transducer and Activator of Transcription-3 Modulation of Cardiac Pathology in Chronic Chagasic Cardiomyopathy. | Hoffman, Kristyn A; Villar, Maria Jose; Poveda, Cristina; Bottazzi, Maria Elena; Hotez, Peter J; Tweardy, David J; Jones, Kathryn M | Frontiers in cellular and infection microbiology | 34504808 | 2021 |
| Pleiotropy data resource as a primer for investigating co-morbidities/multi-morbidities and their role in disease. | Muñoz-Fuentes, Violeta; Haselimashhadi, Hamed; Santos, Luis; Westerberg, Henrik; Parkinson, Helen; Mason, Jeremy | Mammalian genome : official journal of the International Mammalian Genome Society | 34524473 | 2021 Sep 15 |
| Importing genetically altered animals: ensuring quality. | Birling, M-C; Fray, M D; Kasparek, P; Kopkanova, J; Massimi, M; Matteoni, R; Montoliu, L; Nutter, L M J; Raspa, M; Rozman, J; Ryder, E J; Scavizzi, F; Voikar, V; Wells, S; Pavlovic, G; Teboul, L | Mammalian genome : official journal of the International Mammalian Genome Society | 34536110 | 2022 Mar |
| Biology before the SOS Response-DNA Damage Mechanisms at Chromosome Fragile Sites. | Fitzgerald, Devon M; Rosenberg, Susan M | Cells | 34571923 | 2021 09 01 |
| PHDs/CPT1B/VDAC1 axis regulates long-chain fatty acid oxidation in cardiomyocytes. | Angelini, Aude; Saha, Pradip K; Jain, Antrix; Jung, Sung Yun; Mynatt, Randall L; Pi, Xinchun; Xie, Liang | Cell reports | 34610308 | 2021 10 05 |
| A metabolome atlas of the aging mouse brain. | Ding, Jun; Ji, Jian; Rabow, Zachary; Shen, Tong; Folz, Jacob; Brydges, Christopher R; Fan, Sili; Lu, Xinchen; Mehta, Sajjan; Showalter, Megan R; Zhang, Ying; Araiza, Renee; Bower, Lynette R; Lloyd, K C Kent; Fiehn, Oliver | Nature communications | 34654818 | 2021 10 15 |
| Progress towards completing the mutant mouse null resource. | Peterson, Kevin A; Murray, Stephen A | Mammalian genome : official journal of the International Mammalian Genome Society | 34698892 | 2021 Oct 26 |
| 100,000 Genomes Pilot on Rare-Disease Diagnosis in Health Care - Preliminary Report. | 100,000 Genomes Project Pilot Investigators; Smedley, Damian; Smith, Katherine R; Martin, Antonio; Thomas, Ellen A; McDonagh, Ellen M; Cipriani, Valentina; Ellingford, Jamie M; Arno, Gavin; Tucci, Arianna; Vandrovcova, Jana; Chan, Georgia; Williams, Hywel J; Ratnaike, Thiloka; Wei, Wei; Stirrups, Kathleen; Ibanez, Kristina; Moutsianas, Loukas; Wielscher, Matthias; Need, Anna; Barnes, Michael R; Vestito, Letizia; Buchanan, James; Wordsworth, Sarah; Ashford, Sofie; Rehmström, Karola; Li, Emily; Fuller, Gavin; Twiss, Philip; Spasic-Boskovic, Olivera; Halsall, Sally; Floto, R Andres; Poole, Kenneth; Wagner, Annette; Mehta, Sarju G; Gurnell, Mark; Burrows, Nigel; James, Roger; Penkett, Christopher; Dewhurst, Eleanor; Gräf, Stefan; Mapeta, Rutendo; Kasanicki, Mary; Haworth, Andrea; Savage, Helen; Babcock, Melanie; Reese, Martin G; Bale, Mark; Baple, Emma; Boustred, Christopher; Brittain, Helen; de Burca, Anna; Bleda, Marta; Devereau, Andrew; Halai, Dina; Haraldsdottir, Eik; Hyder, Zerin; Kasperaviciute, Dalia; Patch, Christine; Polychronopoulos, Dimitris; Matchan, Angela; Sultana, Razvan; Ryten, Mina; Tavares, Ana L T; Tregidgo, Carolyn; Turnbull, Clare; Welland, Matthew; Wood, Suzanne; Snow, Catherine; Williams, Eleanor; Leigh, Sarah; Foulger, Rebecca E; Daugherty, Louise C; Niblock, Olivia; Leong, Ivone U S; Wright, Caroline F; Davies, Jim; Crichton, Charles; Welch, James; Woods, Kerrie; Abulhoul, Lara; Aurora, Paul; Bockenhauer, Detlef; Broomfield, Alexander; Cleary, Maureen A; Lam, Tanya; Dattani, Mehul; Footitt, Emma; Ganesan, Vijeya; Grunewald, Stephanie; Compeyrot-Lacassagne, Sandrine; Muntoni, Francesco; Pilkington, Clarissa; Quinlivan, Rosaline; Thapar, Nikhil; Wallis, Colin; Wedderburn, Lucy R; Worth, Austen; Bueser, Teofila; Compton, Cecilia; Deshpande, Charu; Fassihi, Hiva; Haque, Eshika; Izatt, Louise; Josifova, Dragana; Mohammed, Shehla; Robert, Leema; Rose, Sarah; Ruddy, Deborah; Sarkany, Robert; Say, Genevieve; Shaw, Adam C; Wolejko, Agata; Habib, Bishoy; Burns, Gavin; Hunter, Sarah; Grocock, Russell J; Humphray, Sean J; Robinson, Peter N; Haendel, Melissa; Simpson, Michael A; Banka, Siddharth; Clayton-Smith, Jill; Douzgou, Sofia; Hall, Georgina; Thomas, Huw B; O'Keefe, Raymond T; Michaelides, Michel; Moore, Anthony T; Malka, Sam; Pontikos, Nikolas; Browning, Andrew C; Straub, Volker; Gorman, Gráinne S; Horvath, Rita; Quinton, Richard; Schaefer, Andrew M; Yu-Wai-Man, Patrick; Turnbull, Doug M; McFarland, Robert; Taylor, Robert W; O'Connor, Emer; Yip, Janice; Newland, Katrina; Morris, Huw R; Polke, James; Wood, Nicholas W; Campbell, Carolyn; Camps, Carme; Gibson, Kate; Koelling, Nils; Lester, Tracy; Németh, Andrea H; Palles, Claire; Patel, Smita; Roy, Noemi B A; Sen, Arjune; Taylor, John; Cacheiro, Pilar; Jacobsen, Julius O; Seaby, Eleanor G; Davison, Val; Chitty, Lyn; Douglas, Angela; Naresh, Kikkeri; McMullan, Dom; Ellard, Sian; Temple, I Karen; Mumford, Andrew D; Wilson, Gill; Beales, Phil; Bitner-Glindzicz, Maria; Black, Graeme; Bradley, John R; Brennan, Paul; Burn, John; Chinnery, Patrick F; Elliott, Perry; Flinter, Frances; Houlden, Henry; Irving, Melita; Newman, William; Rahman, Shamima; Sayer, John A; Taylor, Jenny C; Webster, Andrew R; Wilkie, Andrew O M; Ouwehand, Willem H; Raymond, F Lucy; Chisholm, John; Hill, Sue; Bentley, David; Scott, Richard H; Fowler, Tom; Rendon, Augusto; Caulfield, Mark | The New England journal of medicine | 34758253 | 2021 11 11 |
| Dimensional reduction of phenotypes from 53 000 mouse models reveals a diverse landscape of gene function. | Konopka, Tomasz; Vestito, Letizia; Smedley, Damian | Bioinformatics advances | 34870209 | 2021 |
| Transient Ascaris suum larval migration induces intractable chronic pulmonary disease and anemia in mice. | Wu, Yifan; Li, Evan; Knight, Morgan; Adeniyi-Ipadeola, Grace; Song, Li-Zhen; Burns, Alan R; Gazzinelli-Guimaraes, Ana Clara; Fujiwara, Ricardo; Bottazzi, Maria Elena; Weatherhead, Jill E | PLoS neglected tropical diseases | 34914687 | 2021 12 |
| Myocardial Rev-erb-Mediated Diurnal Metabolic Rhythm and Obesity Paradox. | Song, Shiyang; Tien, Chih-Liang; Cui, Hao; Basil, Paul; Zhu, Ningxia; Gong, Yingyun; Li, Wenbo; Li, Hui; Fan, Qiying; Min Choi, Jong; Luo, Weijia; Xue, Yanfeng; Cao, Rui; Zhou, Wenjun; Ortiz, Andrea R; Stork, Brittany; Mundra, Vatsala; Putluri, Nagireddy; York, Brian; Chu, Maoping; Chang, Jiang; Yun Jung, Sung; Xie, Liang; Song, Jiangping; Zhang, Lilei; Sun, Zheng | Circulation | 35034472 | 2022 02 08 |
| Making sense of the linear genome, gene function and TADs. | Long, Helen S; Greenaway, Simon; Powell, George; Mallon, Ann-Marie; Lindgren, Cecilia M; Simon, Michelle M | Epigenetics & chromatin | 35090532 | 2022 01 29 |
| LMOD2-related dilated cardiomyopathy presenting in late infancy. | Lay, Erica; Azamian, Mahshid S; Denfield, Susan W; Dreyer, William; Spinner, Joseph A; Kearney, Debra; Zhang, Lilei; Worley, Kim C; Bi, Weimin; Lalani, Seema R | American journal of medical genetics. Part A | 35188328 | 2022 Feb 21 |
| ADAD2 regulates heterochromatin in meiotic and post-meiotic male germ cells via translation of MDC1. | Chukrallah, Lauren G; Badrinath, Aditi; Vittor, Gabrielle G; Snyder, Elizabeth M | Journal of cell science | 35191498 | 2022 02 15 |
| Defining the mammalian coactivation of hepatic 12-h clock and lipid metabolism. | Meng, Huan; Gonzales, Naomi M; Jung, Sung Yun; Lu, Yue; Putluri, Nagireddy; Zhu, Bokai; Dacso, Clifford C; Lonard, David M; O'Malley, Bert W | Cell reports | 35263593 | 2022 03 08 |
| Phenotype-driven approaches to enhance variant prioritization and diagnosis of rare disease. | Jacobsen, Julius O B; Kelly, Catherine; Cipriani, Valentina; Research Consortium, Genomics England; Mungall, Christopher J; Reese, Justin; Danis, Daniel; Robinson, Peter N; Smedley, Damian | Human mutation | 35391505 | 2022 Apr 07 |
| Mouse mutagenesis and phenotyping to generate models of development and disease. | Gridley, Thomas; Murray, Stephen A | Current topics in developmental biology | 35461561 | 2022 |
| A novel DPH5-related diphthamide-deficiency syndrome causing embryonic lethality or profound neurodevelopmental disorder. | Shankar, Suma P; Grimsrud, Kristin; Lanoue, Louise; Egense, Alena; Willis, Brandon; Hörberg, Johanna; AlAbdi, Lama; Mayer, Klaus; Ütkür, Koray; Monaghan, Kristin G; Krier, Joel; Stoler, Joan; Alnemer, Maha; Shankar, Prabhu R; Schaffrath, Raffael; Alkuraya, Fowzan S; Brinkmann, Ulrich; Eriksson, Leif A; Lloyd, Kent; Rauen, Katherine A; Undiagnosed Diseases Network | Genetics in medicine : official journal of the American College of Medical Genetics | 35482014 | 2022 07 |
| Identifying genetic determinants of inflammatory pain in mice using a large-scale gene-targeted screen. | Wotton, Janine M; Peterson, Emma; Flenniken, Ann M; Bains, Rasneer S; Veeraragavan, Surabi; Bower, Lynette R; Bubier, Jason A; Parisien, Marc; Bezginov, Alexandr; Haselimashhadi, Hamed; Mason, Jeremy; Moore, Michayla A; Stewart, Michelle E; Clary, Dave A; Delbarre, Daniel J; Anderson, Laura C; D'Souza, Abigail; Goodwin, Leslie O; Harrison, Mark E; Huang, Ziyue; Mckay, Matthew; Qu, Dawei; Santos, Luis; Srinivasan, Subhiksha; Urban, Rachel; Vukobradovic, Igor; Ward, Christopher S; Willett, Amelia M; Braun, Robert E; Brown, Steve D M; Dickinson, Mary E; Heaney, Jason D; Kumar, Vivek; Lloyd, K C Kent; Mallon, Ann-Marie; McKerlie, Colin; Murray, Stephen A; Nutter, Lauryl M J; Parkinson, Helen; Seavitt, John R; Wells, Sara; Samaco, Rodney C; Chesler, Elissa J; Smedley, Damian; Diatchenko, Luda; Baumbauer, Kyle M; Young, Erin E; Bonin, Robert P; Mandillo, Silvia; White, Jacqueline K; International Mouse Phenotyping Consortium | Pain | 35552317 | 2022 Jun 01 |
| Calcium/calmodulin-dependent protein kinase kinase 2 regulates hepatic fuel metabolism. | Stork, Brittany A; Dean, Adam; Ortiz, Andrea R; Saha, Pradip; Putluri, Nagireddy; Planas-Silva, Maricarmen D; Mahmud, Iqbal; Rajapakshe, Kimal; Coarfa, Cristian; Knapp, Stefan; Lorenzi, Philip L; Kemp, Bruce E; Turk, Benjamin E; Scott, John W; Means, Anthony R; York, Brian | Molecular metabolism | 35562082 | 2022 08 |
| Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases. | Jacobsen, Julius O B; Kelly, Catherine; Cipriani, Valentina; Robinson, Peter N; Smedley, Damian | Briefings in bioinformatics | 35595299 | 2022 09 20 |
| MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses. | Devine, Jay; Vidal-García, Marta; Liu, Wei; Neves, Amanda; Lo Vercio, Lucas D; Green, Rebecca M; Richbourg, Heather A; Marchini, Marta; Unger, Colton M; Nickle, Audrey C; Radford, Bethany; Young, Nathan M; Gonzalez, Paula N; Schuler, Robert E; Bugacov, Alejandro; Rolian, Campbell; Percival, Christopher J; Williams, Trevor; Niswander, Lee; Calof, Anne L; Lander, Arthur D; Visel, Axel; Jirik, Frank R; Cheverud, James M; Klein, Ophir D; Birnbaum, Ramon Y; Merrill, Amy E; Ackermann, Rebecca R; Graf, Daniel; Hemberger, Myriam; Dean, Wendy; Forkert, Nils D; Murray, Stephen A; Westerberg, Henrik; Marcucio, Ralph S; Hallgrímsson, Benedikt | Scientific data | 35614082 | 2022 May 25 |
| The GA4GH Phenopacket schema defines a computable representation of clinical data. | Jacobsen, Julius O B; Baudis, Michael; Baynam, Gareth S; Beckmann, Jacques S; Beltran, Sergi; Buske, Orion J; Callahan, Tiffany J; Chute, Christopher G; Courtot, Mélanie; Danis, Daniel; Elemento, Olivier; Essenwanger, Andrea; Freimuth, Robert R; Gargano, Michael A; Groza, Tudor; Hamosh, Ada; Harris, Nomi L; Kaliyaperumal, Rajaram; Lloyd, Kevin C Kent; Khalifa, Aly; Krawitz, Peter M; Köhler, Sebastian; Laraway, Brian J; Lehväslaiho, Heikki; Matalonga, Leslie; McMurry, Julie A; Metke-Jimenez, Alejandro; Mungall, Christopher J; Munoz-Torres, Monica C; Ogishima, Soichi; Papakonstantinou, Anastasios; Piscia, Davide; Pontikos, Nikolas; Queralt-Rosinach, Núria; Roos, Marco; Sass, Julian; Schofield, Paul N; Seelow, Dominik; Siapos, Anastasios; Smedley, Damian; Smith, Lindsay D; Steinhaus, Robin; Sundaramurthi, Jagadish Chandrabose; Swietlik, Emilia M; Thun, Sylvia; Vasilevsky, Nicole A; Wagner, Alex H; Warner, Jeremy L; Weiland, Claus; GAGH Phenopacket Modeling Consortium; Haendel, Melissa A; Robinson, Peter N | Nature biotechnology | 35705716 | 2022 Jun |
| Preventing Cholesterol-Induced Perk (Protein Kinase RNA-Like Endoplasmic Reticulum Kinase) Signaling in Smooth Muscle Cells Blocks Atherosclerotic Plaque Formation. | Chattopadhyay, Abhijnan; Guan, Pujun; Majumder, Suravi; Kaw, Kaveeta; Zhou, Zhen; Zhang, Chen; Prakash, Siddharth K; Kaw, Anita; Buja, L Maximillian; Kwartler, Callie S; Milewicz, Dianna M | Arteriosclerosis, thrombosis, and vascular biology | 35708026 | 2022 08 |
| SIRPα Mediates IGF1 Receptor in Cardiomyopathy Induced by Chronic Kidney Disease. | Thomas, Sandhya S; Wu, Jiao; Davogustto, Giovanni; Holliday, Michael W; Eckel-Mahan, Kristin; Verzola, Daniela; Garibotto, Giacomo; Hu, Zhaoyong; Mitch, William E; Taegtmeyer, Heinrich | Circulation research | 35722884 | 2022 Jul 22 |
| Systemic Ablation of Camkk2 Impairs Metastatic Colonization and Improves Insulin Sensitivity in TRAMP Mice: Evidence for Cancer Cell-Extrinsic CAMKK2 Functions in Prostate Cancer. | Pulliam, Thomas L; Awad, Dominik; Han, Jenny J; Murray, Mollianne M; Ackroyd, Jeffrey J; Goli, Pavithr; Oakhill, Jonathan S; Scott, John W; Ittmann, Michael M; Frigo, Daniel E | Cells | 35741020 | 2022 06 10 |
| Arap1 loss causes retinal pigment epithelium phagocytic dysfunction and subsequent photoreceptor death. | Shao, Andy; Lopez, Antonio Jacobo; Chen, JiaJia; Tham, Addy; Javier, Seanne; Quiroz, Alejandra; Frick, Sonia; Levine, Edward M; Lloyd, K C Kent; Leonard, Brian C; Murphy, Christopher J; Glaser, Thomas M; Moshiri, Ala | Disease models & mechanisms | 35758026 | 2022 Jul 01 |
| Phenotype-aware prioritisation of rare Mendelian disease variants. | Kelly, Catherine; Szabo, Anita; Pontikos, Nikolas; Arno, Gavin; Robinson, Peter N; Jacobsen, Jules O B; Smedley, Damian; Cipriani, Valentina | Trends in genetics : TIG | 35934592 | 2022 Dec |
| Multivariate phenotype analysis enables genome-wide inference of mammalian gene function. | Nicholson, George; Morgan, Hugh; Ganjgahi, Habib; Brown, Steve D M; Mallon, Ann-Marie; Holmes, Chris | PLoS biology | 35944064 | 2022 Aug |
| Kctd7 deficiency induces myoclonic seizures associated with Purkinje cell death and microvascular defects. | Liang, Justine H; Alevy, Jonathan; Akhanov, Viktor; Seo, Ryan; Massey, Cory A; Jiang, Danye; Zhou, Joy; Sillitoe, Roy V; Noebels, Jeffrey L; Samuel, Melanie A | Disease models & mechanisms | 35972048 | 2022 09 01 |
| Clinical exome sequencing uncovers a high frequency of Mendelian disorders in infants with stroke: A retrospective analysis. | Kumar, Runjun D; Meng, Linyan; Liu, Pengfei; Miyake, Christina Y; Worley, Kim C; Bi, Weimin; Lalani, Seema R | American journal of medical genetics. Part A | 36065636 | 2022 Sep 06 |
| Promoting validation and cross-phylogenetic integration in model organism research. | Cheng, Keith C; Burdine, Rebecca D; Dickinson, Mary E; Ekker, Stephen C; Lin, Alex Y; Lloyd, K C Kent; Lutz, Cathleen M; MacRae, Calum A; Morrison, John H; O'Connor, David H; Postlethwait, John H; Rogers, Crystal D; Sanchez, Susan; Simpson, Julie H; Talbot, William S; Wallace, Douglas C; Weimer, Jill M; Bellen, Hugo J | Disease models & mechanisms | 36125045 | 2022 09 01 |
| Mendelian gene identification through mouse embryo viability screening. | Cacheiro, Pilar; Westerberg, Carl Henrik; Mager, Jesse; Dickinson, Mary E; Nutter, Lauryl M J; Muñoz-Fuentes, Violeta; Hsu, Chih-Wei; Van den Veyver, Ignatia B; Flenniken, Ann M; McKerlie, Colin; Murray, Stephen A; Teboul, Lydia; Heaney, Jason D; Lloyd, K C Kent; Lanoue, Louise; Braun, Robert E; White, Jacqueline K; Creighton, Amie K; Laurin, Valerie; Guo, Ruolin; Qu, Dawei; Wells, Sara; Cleak, James; Bunton-Stasyshyn, Rosie; Stewart, Michelle; Harrisson, Jackie; Mason, Jeremy; Haseli Mashhadi, Hamed; Parkinson, Helen; Mallon, Ann-Marie; International Mouse Phenotyping Consortium; Genomics England Research Consortium; Smedley, Damian | Genome medicine | 36229886 | 2022 Oct 13 |
| Baat Gene Knockout Alters Post-Natal Development, the Gut Microbiome, and Reveals Unusual Bile Acids in Mice. | Neugebauer, Kerri A; Okros, Maxwell; Guzior, Douglas V; Feiner, Jeremiah; Chargo, Nicholas J; Rzepka, Madison; Schilmiller, Anthony L; O'Reilly, Sandra; Jones, A Daniel; Watson, Victoria E; Luyendyk, James P; McCabe, Laura R; Quinn, Robert A | Journal of lipid research | 36243101 | 2022 Dec |
| The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease. | Groza, Tudor; Gomez, Federico Lopez; Mashhadi, Hamed Haseli; Muñoz-Fuentes, Violeta; Gunes, Osman; Wilson, Robert; Cacheiro, Pilar; Frost, Anthony; Keskivali-Bond, Piia; Vardal, Bora; McCoy, Aaron; Cheng, Tsz Kwan; Santos, Luis; Wells, Sara; Smedley, Damian; Mallon, Ann-Marie; Parkinson, Helen | Nucleic acids research | 36305825 | 2022 Oct 28 |
| The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource. | Sollis, Elliot; Mosaku, Abayomi; Abid, Ala; Buniello, Annalisa; Cerezo, Maria; Gil, Laurent; Groza, Tudor; Güneş, Osman; Hall, Peggy; Hayhurst, James; Ibrahim, Arwa; Ji, Yue; John, Sajo; Lewis, Elizabeth; MacArthur, Jacqueline A L; McMahon, Aoife; Osumi-Sutherland, David; Panoutsopoulou, Kalliope; Pendlington, Zoë; Ramachandran, Santhi; Stefancsik, Ray; Stewart, Jonathan; Whetzel, Patricia; Wilson, Robert; Hindorff, Lucia; Cunningham, Fiona; Lambert, Samuel A; Inouye, Michael; Parkinson, Helen; Harris, Laura W | Nucleic acids research | 36350656 | 2022 Nov 09 |
| Neuronal signal-regulatory protein alpha drives microglial phagocytosis by limiting microglial interaction with CD47 in the retina. | Jiang, Danye; Burger, Courtney A; Akhanov, Viktor; Liang, Justine H; Mackin, Robert D; Albrecht, Nicholas E; Andrade, Pilar; Schafer, Dorothy P; Samuel, Melanie A | Immunity | 36379210 | 2022 Dec 13 |
| Analysis of genome-wide knockout mouse database identifies candidate ciliopathy genes. | Higgins, Kendall; Moore, Bret A; Berberovic, Zorana; Adissu, Hibret A; Eskandarian, Mohammad; Flenniken, Ann M; Shao, Andy; Imai, Denise M; Clary, Dave; Lanoue, Louise; Newbigging, Susan; Nutter, Lauryl M J; Adams, David J; Bosch, Fatima; Braun, Robert E; Brown, Steve D M; Dickinson, Mary E; Dobbie, Michael; Flicek, Paul; Gao, Xiang; Galande, Sanjeev; Grobler, Anne; Heaney, Jason D; Herault, Yann; de Angelis, Martin Hrabe; Chin, Hsian-Jean Genie; Mammano, Fabio; Qin, Chuan; Shiroishi, Toshihiko; Sedlacek, Radislav; Seong, J-K; Xu, Ying; IMPC Consortium; Lloyd, K C Kent; McKerlie, Colin; Moshiri, Ala | Scientific reports | 36456625 | 2022 Dec 01 |
| Sex differences in allometry for phenotypic traits in mice indicate that females are not scaled males. | Wilson, Laura A B; Zajitschek, Susanne R K; Lagisz, Malgorzata; Mason, Jeremy; Haselimashhadi, Hamed; Nakagawa, Shinichi | Nature communications | 36509767 | 2022 Dec 12 |
| A novel model of gestational diabetes: Acute high fat high sugar diet results in insulin resistance and beta cell dysfunction during pregnancy in mice. | Mishra, Akansha; Ruano, Simone Hernandez; Saha, Pradip K; Pennington, Kathleen A | PloS one | 36520818 | 2022 |
| Dysregulated systemic metabolism in a Down syndrome mouse model. | Sarver, Dylan C; Xu, Cheng; Velez, Leandro M; Aja, Susan; Jaffe, Andrew E; Seldin, Marcus M; Reeves, Roger H; Wong, G William | Molecular metabolism | 36587842 | 2023 Feb |
| Three-dimensional microCT imaging of mouse heart development from early post-implantation to late fetal stages. | Li-Villarreal, Nanbing; Rasmussen, Tara L; Christiansen, Audrey E; Dickinson, Mary E; Hsu, Chih-Wei | Mammalian genome : official journal of the International Mammalian Genome Society | 36595063 | 2023 Jan 03 |
| A bioengineered probiotic for the oral delivery of a peptide Kv1.3 channel blocker to treat rheumatoid arthritis. | Wang, Yuqing; Zhu, Duolong; Ortiz-Velez, Laura C; Perry, Jacob L; Pennington, Michael W; Hyser, Joseph M; Britton, Robert A; Beeton, Christine | Proceedings of the National Academy of Sciences of the United States of America | 36595694 | 2023 Jan 10 |
| Localized cardiac metabolic trajectories and post-infectious metabolic sequelae in experimental Chagas disease. | Liu, Zongyuan; Ulrich, Rebecca; Kendricks, April L; Wheeler, Kate; Leão, Ana Carolina; Pollet, Jeroen; Bottazzi, Maria Elena; Hotez, Peter; Gusovsky, Fabian; Jones, Kathryn M; McCall, Laura-Isobel | Research square | 36711878 | 2023 Jan 20 |
| Genome-wide screening reveals the genetic basis of mammalian embryonic eye development. | Chee, Justine M; Lanoue, Louise; Clary, Dave; Higgins, Kendall; Bower, Lynette; Flenniken, Ann; Guo, Ruolin; Adams, David J; Bosch, Fatima; Braun, Robert E; Brown, Steve D M; Chin, H-J Genie; Dickinson, Mary E; Hsu, Chih-Wei; Dobbie, Michael; Gao, Xiang; Galande, Sanjeev; Grobler, Anne; Heaney, Jason D; Herault, Yann; de Angelis, Martin Hrabe; Mammano, Fabio; Nutter, Lauryl M J; Parkinson, Helen; Qin, Chuan; Shiroishi, Toshi; Sedlacek, Radislav; Seong, J-K; Xu, Ying; International Mouse Phenotyping Consortium; Brooks, Brian; McKerlie, Colin; Lloyd, K C Kent; Westerberg, Henrik; Moshiri, Ala | BMC biology | 36737727 | 2023 Feb 03 |
| Knockout mice are an important tool for human monogenic heart disease studies. | Cacheiro, Pilar; Spielmann, Nadine; Mashhadi, Hamed Haseli; Fuchs, Helmut; Gailus-Durner, Valerie; Smedley, Damian; de Angelis, Martin Hrabĕ | Disease models & mechanisms | 36825469 | 2023 May 01 |
| Vaccine-linked chemotherapy improves cardiac structure and function in a mouse model of chronic Chagas disease. | Jones, Kathryn M; Mangin, Elise N; Reynolds, Corey L; Villanueva, Liliana E; Cruz, Julio Vladimir; Versteeg, Leroy; Keegan, Brian; Kendricks, April; Pollet, Jeroen; Gusovsky, Fabian; Bottazzi, Maria Elena; Hotez, Peter J | Frontiers in cellular and infection microbiology | 36844399 | 2023 |
| Essential genes: a cross-species perspective. | Cacheiro, Pilar; Smedley, Damian | Mammalian genome : official journal of the International Mammalian Genome Society | 36897351 | 2023 Mar 10 |
| Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation. | Elliott, Kelsey H; Balchand, Sai K; Bonatto Paese, Christian Louis; Chang, Ching-Fang; Yang, Yanfen; Brown, Kari M; Rasicci, Daniel T; He, Hao; Thorner, Konrad; Chaturvedi, Praneet; Murray, Stephen A; Chen, Jing; Porollo, Aleksey; Peterson, Kevin A; Brugmann, Samantha A | Development (Cambridge, England) | 36971348 | 2023 Apr 15 |
| The role of Limch1 alternative splicing in skeletal muscle function. | Penna, Matthew S; Hu, Rong-Chi; Rodney, George G; Cooper, Thomas A | Life science alliance | 36977593 | 2023 Jun |
| Evolution of cisplatin resistance through coordinated metabolic reprogramming of the cellular reductive state. | Yu, Wangie; Chen, Yunyun; Putluri, Nagireddy; Osman, Abdullah; Coarfa, Cristian; Putluri, Vasanta; Kamal, Abu H M; Asmussen, Jennifer Kay; Katsonis, Panagiotis; Myers, Jeffrey N; Lai, Stephen Y; Lu, Wuhao; Stephan, Clifford C; Powell, Reid T; Johnson, Faye M; Skinner, Heath D; Kazi, Jawad; Ahmed, Kazi Mokim; Hu, Linghao; Threet, Addison; Meyer, Matthew D; Bankson, James A; Wang, Tony; Davis, Jack; Parker, Kirby R; Harris, Madison A; Baek, Mokryun L; Echeverria, Gloria V; Qi, Xiaoli; Wang, Jin; Frederick, Andy I; Walsh, Alex J; Lichtarge, Olivier; Frederick, Mitchell J; Sandulache, Vlad C | British journal of cancer | 37012319 | 2023 Jun |
| Astrocytic Slc4a4 regulates blood-brain barrier integrity in healthy and stroke brains via a NO-CCL2-CCR2 pathway. | Ye, Qi; Jo, Juyeon; Wang, Chih-Yen; Oh, Heavin; Choy, Tiffany J; Kim, Kyoungin; Dâ Alessandro, Angelo; Reshetnyak, Yana K; Jung, Sung Yun; Chen, Zheng; Marrelli, Sean P; Lee, Hyun Kyoung | bioRxiv : the preprint server for biology | 37066295 | 2023 Apr 03 |
| Topologically associating domain boundaries are required for normal genome function. | Rajderkar, Sudha; Barozzi, Iros; Zhu, Yiwen; Hu, Rong; Zhang, Yanxiao; Li, Bin; Alcaina Caro, Ana; Fukuda-Yuzawa, Yoko; Kelman, Guy; Akeza, Adyam; Blow, Matthew J; Pham, Quan; Harrington, Anne N; Godoy, Janeth; Meky, Eman M; von Maydell, Kianna; Hunter, Riana D; Akiyama, Jennifer A; Novak, Catherine S; Plajzer-Frick, Ingrid; Afzal, Veena; Tran, Stella; Lopez-Rios, Javier; Talkowski, Michael E; Lloyd, K C Kent; Ren, Bing; Dickel, Diane E; Visel, Axel; Pennacchio, Len A | Communications biology | 37081156 | 2023 Apr 20 |
| Downregulation of FKBP5 Promotes Atrial Arrhythmogenesis. | Wang, Xiaolei; Song, Jia; Yuan, Yue; Li, Luge; Abu-Taha, Issam; Heijman, Jordi; Sun, Liang; Dobrev, Shokoufeh; Kamler, Markus; Xie, Liang; Wehrens, Xander H T; Horrigan, Frank T; Dobrev, Dobromir; Li, Na | Circulation research | 37154033 | 2023 Jun 23 |
| A consensus score to combine inferences from multiple centres. | Haselimashhadi, Hamed; Babalola, Kolawole; Wilson, Robert; Groza, Tudor; Muñoz-Fuentes, Violeta | Mammalian genome : official journal of the International Mammalian Genome Society | 37154937 | 2023 Sep |
| Comprehensive ECG reference intervals in C57BL/6N substrains provide a generalizable guide for cardiac electrophysiology studies in mice. | Oestereicher, Manuela A; Wotton, Janine M; Ayabe, Shinya; Bou About, Ghina; Cheng, Tsz Kwan; Choi, Jae-Hoon; Clary, Dave; Dew, Emily M; Elfertak, Lahcen; Guimond, Alain; Haseli Mashhadi, Hamed; Heaney, Jason D; Kelsey, Lois; Keskivali-Bond, Piia; Lopez Gomez, Federico; Marschall, Susan; McFarland, Michael; Meziane, Hamid; Munoz Fuentes, Violeta; Nam, Ki-Hoan; Nichtová, Zuzana; Pimm, Dale; Bower, Lynette; Prochazka, Jan; Rozman, Jan; Santos, Luis; Stewart, Michelle; Tanaka, Nobuhiko; Ward, Christopher S; Willett, Amelia M E; Wilson, Robert; Braun, Robert E; Dickinson, Mary E; Flenniken, Ann M; Herault, Yann; Lloyd, K C Kent; Mallon, Ann-Marie; McKerlie, Colin; Murray, Stephen A; Nutter, Lauryl M J; Sedlacek, Radislav; Seong, Je Kyung; Sorg, Tania; Tamura, Masaru; Wells, Sara; Schneltzer, Elida; Fuchs, Helmut; Gailus-Durner, Valerie; Hrabe de Angelis, Martin; White, Jacqueline K; Spielmann, Nadine | Mammalian genome : official journal of the International Mammalian Genome Society | 37294348 | 2023 Jun |
| Whole genome analysis for 163 gRNAs in Cas9-edited mice reveals minimal off-target activity. | Peterson, Kevin A; Khalouei, Sam; Hanafi, Nour; Wood, Joshua A; Lanza, Denise G; Lintott, Lauri G; Willis, Brandon J; Seavitt, John R; Braun, Robert E; Dickinson, Mary E; White, Jacqueline K; Lloyd, K C Kent; Heaney, Jason D; Murray, Stephen A; Ramani, Arun; Nutter, Lauryl M J | Communications biology | 37301944 | 2023 Jun 10 |
| Smooth muscle α-actin missense variant promotes atherosclerosis through modulation of intracellular cholesterol in smooth muscle cells. | Kaw, Kaveeta; Chattopadhyay, Abhijnan; Guan, Pujun; Chen, Jiyuan; Majumder, Suravi; Duan, Xue-Yan; Ma, Shuangtao; Zhang, Chen; Kwartler, Callie S; Milewicz, Dianna M | European heart journal | 37377039 | 2023 Aug 01 |
| Delayed skeletal development and IGF-1 deficiency in a mouse model of lysinuric protein intolerance. | Stroup, Bridget M; Li, Xiaohui; Ho, Sara; Zhouyao, Haonan; Chen, Yuqing; Ani, Safa; Dawson, Brian; Jin, Zixue; Marom, Ronit; Jiang, Ming-Ming; Lorenzo, Isabel; Rosen, Daniel; Lanza, Denise; Aceves, Nathalie; Koh, Sara; Seavitt, John R; Heaney, Jason D; Lee, Brendan; Burrage, Lindsay C | Disease models & mechanisms | 37486182 | 2023 Aug 01 |
| DISCOVERY AND VALIDATION OF GENES DRIVING DRUG-INTAKE AND RELATED BEHAVIORAL TRAITS IN MICE. | Roy, Tyler A; Bubier, Jason A; Dickson, Price E; Wilcox, Troy D; Ndukum, Juliet; Clark, James W; Rizzo, Stacey J Sukoff; Crabbe, John C; Denegre, James M; Svenson, Karen L; Braun, Robert E; Kumar, Vivek; Murray, Stephen A; White, Jacqueline K; Philip, Vivek M; Chesler, Elissa J | bioRxiv : the preprint server for biology | 37503148 | 2023 Jul 10 |
| Characterization of atrial and ventricular remodeling in an improved minimally invasive mouse model of transverse aortic constriction. | Navarro-Garcia, Jose Alberto; Lahiri, Satadru K; Aguilar-Sanchez, Yuriana; Reddy, Anilkumar K; Wehrens, Xander H T | The journal of cardiovascular aging | 37538440 | 2023 Jul |
| Chronic kidney disease promotes atrial fibrillation via inflammasome pathway activation. | Song, Jia; Navarro-Garcia, Jose Alberto; Wu, Jiao; Saljic, Arnela; Abu-Taha, Issam; Li, Luge; Lahiri, Satadru K; Keefe, Joshua A; Aguilar-Sanchez, Yuriana; Moore, Oliver M; Yuan, Yue; Wang, Xiaolei; Kamler, Markus; Mitch, William E; Ruiz-Hurtado, Gema; Hu, Zhaoyong; Thomas, Sandhya S; Dobrev, Dobromir; Wehrens, Xander Ht; Li, Na | The Journal of clinical investigation | 37581942 | 2023 Oct 02 |
| Sexual Dimorphism of the Mouse Plasma Metabolome Is Associated with Phenotypes of 30 Gene Knockout Lines. | Zhang, Ying; Barupal, Dinesh K; Fan, Sili; Gao, Bei; Zhu, Chao; Flenniken, Ann M; McKerlie, Colin; Nutter, Lauryl M J; Lloyd, Kevin C Kent; Fiehn, Oliver | Metabolites | 37623890 | 2023 Aug 15 |
| Sex differences in paternal arsenic-induced intergenerational metabolic effects are mediated by estrogen. | Xue, Yanfeng; Gong, Yingyun; Li, Xin; Peng, Fei; Ding, Guolian; Zhang, Zhao; Shi, Junchao; Savul, Ilma Saleh; Xu, Yong; Chen, Qi; Han, Leng; Mao, Shengyong; Sun, Zheng | Cell & bioscience | 37691128 | 2023 Sep 10 |
| Cardiac muscle-restricted partial loss of Nos1ap expression has limited but significant impact on electrocardiographic features. | Smith, Alexa; Auer, Dallas; Johnson, Morgan; Sanchez, Ernesto; Ross, Holly; Ward, Christopher; Chakravarti, Aravinda; Kapoor, Ashish | G3 (Bethesda, Md.) | 37708408 | 2023 Nov 01 |
| Speg interactions that regulate the stability of excitation-contraction coupling protein complexes in triads and dyads. | Lee, Chang Seok; Jung, Sung Yun; Yee, Rachel Sue Zhen; Agha, Nadia H; Hong, Jin; Chang, Ting; Babcock, Lyle W; Fleischman, Jorie D; Clayton, Benjamin; Hanna, Amy D; Ward, Christopher S; Lanza, Denise; Hurley, Ayrea E; Zhang, Pumin; Wehrens, Xander H T; Lagor, William R; Rodney, George G; Hamilton, Susan L | Communications biology | 37709832 | 2023 Sep 14 |
| Cleft palate and minor metabolic disturbances in a mouse global Arl15 gene knockout. | Bai, Ying; Bentley, Liz; Ma, Chao; Naveenan, Navaratnam; Cleak, James; Wu, Yixing; Simon, Michelle M; Westerberg, Henrik; Cañas, Ramón Casero; Horner, Neil; Pandey, Rajesh; Paphiti, Keanu; Schulze, Ulrike; Mianné, Joffrey; Hough, Tertius; Teboul, Lydia; de Baaij, Jeroen H F; Cox, Roger D | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 37773757 | 2023 Nov |
| An automated respiratory data pipeline for waveform characteristic analysis. | Lusk, Savannah; Ward, Christopher S; Chang, Andersen; Twitchell-Heyne, Avery; Fattig, Shaun; Allen, Genevera; Jankowsky, Joanna L; Ray, Russell S | The Journal of physiology | 37786382 | 2023 Nov |
| Localized cardiac small molecule trajectories and persistent chemical sequelae in experimental Chagas disease. | Liu, Zongyuan; Ulrich vonBargen, Rebecca; Kendricks, April L; Wheeler, Kate; Leão, Ana Carolina; Sankaranarayanan, Krithivasan; Dean, Danya A; Kane, Shelley S; Hossain, Ekram; Pollet, Jeroen; Bottazzi, Maria Elena; Hotez, Peter J; Jones, Kathryn M; McCall, Laura-Isobel | Nature communications | 37880260 | 2023 Oct 25 |
| Pericentrin deficiency in smooth muscle cells augments atherosclerosis through HSF1-driven cholesterol biosynthesis and PERK activation. | Majumder, Suravi; Chattopadhyay, Abhijnan; Wright, Jamie M; Guan, Pujun; Buja, L Maximilian; Kwartler, Callie S; Milewicz, Dianna M | JCI insight | 37937642 | 2023 Nov 08 |
| Loss of CTRP10 results in female obesity with preserved metabolic health. | Chen, Fangluo; Sarver, Dylan C; Saqib, Muzna; Velez, Leandro M; Aja, Susan; Seldin, Marcus M; Wong, G William | bioRxiv : the preprint server for biology | 37961647 | 2023 Nov 04 |
| Shaping the brain: The emergence of cortical structure and folding. | Akula, Shyam K; Exposito-Alonso, David; Walsh, Christopher A | Developmental cell | 38113850 | 2023 Dec 18 |
| Genetic determinants of micronucleus formation in vivo. | Adams, D J; Barlas, B; McIntyre, R E; Salguero, I; van der Weyden, L; Barros, A; Vicente, J R; Karimpour, N; Haider, A; Ranzani, M; Turner, G; Thompson, N A; Harle, V; Olvera-León, R; Robles-Espinoza, C D; Speak, A O; Geisler, N; Weninger, W J; Geyer, S H; Hewinson, J; Karp, N A; Sanger Mouse Genetics Project; Fu, B; Yang, F; Kozik, Z; Choudhary, J; Yu, L; van Ruiten, M S; Rowland, B D; Lelliott, C J; Del Castillo Velasco-Herrera, M; Verstraten, R; Bruckner, L; Henssen, A G; Rooimans, M A; de Lange, J; Mohun, T J; Arends, M J; Kentistou, K A; Coelho, P A; Zhao, Y; Zecchini, H; Perry, J R B; Jackson, S P; Balmus, G | Nature | 38355793 | 2024 Mar |
| Altered myocardial lipid regulation in junctophilin-2-associated familial cardiomyopathies. | Lahiri, Satadru K; Jin, Feng; Zhou, Yue; Quick, Ann P; Kramm, Carlos F; Wang, Meng C; Wehrens, Xander Ht | Life science alliance | 38438248 | 2024 May |
| Lethal phenotypes in Mendelian disorders. | Cacheiro, Pilar; Lawson, Samantha; Van den Veyver, Ignatia B; Marengo, Gabriel; Zocche, David; Murray, Stephen A; Duyzend, Michael; Robinson, Peter N; Smedley, Damian | Genetics in medicine : official journal of the American College of Medical Genetics | 38629401 | 2024 Jul |
| Machine learning in time-lapse imaging to differentiate embryos from young vs old mice†. | Yang, Liubin; Leynes, Carolina; Pawelka, Ashley; Lorenzo, Isabel; Chou, Andrew; Lee, Brendan; Heaney, Jason D | Biology of reproduction | 38685607 | 2024 Jun 12 |
| Long-term efficacy and safety of cardiac genome editing for catecholaminergic polymorphic ventricular tachycardia. | Moore, Oliver M; Aguilar-Sanchez, Yuriana; Lahiri, Satadru K; Hulsurkar, Mohit M; Alberto Navarro-Garcia, J; Word, Tarah A; Keefe, Joshua A; Barazi, Dean; Munivez, Elda M; Moore, Charles T; Parthasarathy, Vaidya; Davidson, Jaysón; Lagor, William R; Park, So Hyun; Bao, Gang; Miyake, Christina Y; Wehrens, Xander H T | The journal of cardiovascular aging | 38464671 | 2024 Jan |
| An oocyte-specific Cas9-expressing mouse for germline CRISPR/Cas9-mediated genome editing. | Lanza, Denise G; Mao, Jianqiang; Lorenzo, Isabel; Liao, Lan; Seavitt, John R; Ljungberg, M Cecilia; Simpson, Elizabeth M; DeMayo, Francesco J; Heaney, Jason D | Genesis (New York, N.Y. : 2000) | 38523431 | 2024 Apr |
| Rare Variant in MRC2 Associated With Familial Supraventricular Tachycardia and Wolff-Parkinson-White Syndrome. | Potter, Adam S; Miyake, Christina Y; Gonzaga-Jauregui, Claudia; Aguilar-Sanchez, Yuriana; Hulsurkar, Mohit M; Lahiri, Satadru K; Moreira, Lucia M; Mehta, Neelam; Azamian, Mahshid S; Lupski, James R; Reilly, Svetlana; Lalani, Seema R; Wehrens, Xander H T | Circulation. Genomic and precision medicine | 38953222 | 2024 Aug |
| Hematologic DNMT3A reduction and high-fat diet synergize to promote weight gain and tissue inflammation. | Reyes, Jaime M; Tovy, Ayala; Zhang, Linda; Bortoletto, Angelina S; Rosas, Carina; Chen, Chun-Wei; Waldvogel, Sarah M; Guzman, Anna G; Aguilar, Rogelio; Gupta, Sinjini; Liu, Ling; Buckley, Matthew T; Patel, Kalyani R; Marcogliese, Andrea N; Li, Yumei; Curry, Choladda V; Rando, Thomas A; Brunet, Anne; Parchem, Ronald J; Rau, Rachel E; Goodell, Margaret A | iScience | 38414863 | 2024 Mar 15 |
| Lethal phenotypes in Mendelian disorders. | Cacheiro, Pilar; Lawson, Samantha; Van den Veyver, Ignatia B; Marengo, Gabriel; Zocche, David; Murray, Stephen A; Duyzend, Michael; Robinson, Peter N; Smedley, Damian | medRxiv : the preprint server for health sciences | 38260283 | 2024 Jan 13 |
| Atrial Proteomic Profiling Reveals a Switch Towards Profibrotic Gene Expression Program in CREM-IbΔC-X Mice with Persistent Atrial Fibrillation. | Zhao, Shuai; Hulsurkar, Mohit M; Lahiri, Satadru K; Aguilar-Sanchez, Yuriana; Munivez, Elda; Müller, Frank Ulrich; Jain, Antrix; Malovannaya, Anna; Yiu, Kendrick; Reilly, Svetlana; Wehrens, Xander H T | bioRxiv : the preprint server for biology | 38260363 | 2024 Jan 12 |
| Astrocytic Slc4a4 regulates blood-brain barrier integrity in healthy and stroke brains via a CCL2-CCR2 pathway and NO dysregulation. | Ye, Qi; Jo, Juyeon; Wang, Chih-Yen; Oh, Heavin; Zhan, Jiangshan; Choy, Tiffany J; Kim, Kyoung In; D'Alessandro, Angelo; Reshetnyak, Yana K; Jung, Sung Yun; Chen, Zheng; Marrelli, Sean P; Lee, Hyun Kyoung | Cell reports | 38709635 | 2024 May 28 |
| Clinical exome sequencing uncovers genetic disorders in neonates with suspected hypoxic-ischemic encephalopathy: A retrospective analysis. | Parobek, Christian M; Zemet, Roni; Shanahan, Matthew A; Burnett, Brian A; Mizerik, Elizabeth; Rosenfeld, Jill A; Vossaert, Liesbeth; Clark, Steven L; Hunter, Jill V; Lalani, Seema R | Clinical genetics | 38545656 | 2024 Jul |
| Commentary: The International Mouse Phenotyping Consortium: high-throughput in vivo functional annotation of the mammalian genome. | Lloyd, K C Kent | Mammalian genome : official journal of the International Mammalian Genome Society | 39254744 | 2024 Sep 10 |
| CD24 negativity reprograms mitochondrial metabolism to PPARα and NF-κB-driven fatty acid β-oxidation in triple-negative breast cancer. | Murthy, Divya; Dutta, Debasmita; Attri, Kuldeep S; Samanta, Tagari; Yang, Sukjin; Jung, Kwang Hwa; Latario, Sarah G; Putluri, Vasanta; Huang, Shixia; Putluri, Nagireddy; Park, Jun Hyoung; Kaipparettu, Benny Abraham | Cancer letters | 38373689 | 2024 Apr 10 |
| Improving prenatal diagnosis through standards and aggregation. | Duyzend, Michael H; Cacheiro, Pilar; Jacobsen, Julius O B; Giordano, Jessica; Brand, Harrison; Wapner, Ronald J; Talkowski, Michael E; Robinson, Peter N; Smedley, Damian | Prenatal diagnosis | 38242839 | 2024 Apr |
| Discovery and validation of genes driving drug-intake and related behavioral traits in mice. | Roy, Tyler A; Bubier, Jason A; Dickson, Price E; Wilcox, Troy D; Ndukum, Juliet; Clark, James W; Sukoff Rizzo, Stacey J; Crabbe, John C; Denegre, James M; Svenson, Karen L; Braun, Robert E; Kumar, Vivek; Murray, Stephen A; White, Jacqueline K; Philip, Vivek M; Chesler, Elissa J | Genes, brain, and behavior | 38164795 | 2024 Jan 02 |
| Do organisms need an impact factor? Citations of key biological resources including model organisms reveal usage patterns and impact. | Piekniewska, Agata; Anderson, Nathan; Roelandse, Martijn; Lloyd, K C Kent; Korf, Ian; Voss, S Randal; de Castro, Giovanni; Magnani, Diogo M; Varga, Zoltan; James-Zorn, Christina; Horb, Marko; Grethe, Jeffery S; Bandrowski, Anita | bioRxiv : the preprint server for biology | 38293091 | 2024 Jan 16 |
| Computational identification of disease models through cross-species phenotype comparison. | Cacheiro, Pilar; Pava, Diego; Parkinson, Helen; VanZanten, Maya; Wilson, Robert; Gunes, Osman; The International Mouse Phenotyping Consortium; Smedley, Damian | Disease models & mechanisms | 38881316 | 2024 Jun 01 |
| Long-read sequencing for fast and robust identification of correct genome-edited alleles: PCR-based and Cas9 capture methods. | McCabe, Christopher V; Price, Peter D; Codner, Gemma F; Allan, Alasdair J; Caulder, Adam; Christou, Skevoulla; Loeffler, Jorik; Mackenzie, Matthew; Malzer, Elke; Mianné, Joffrey; Nowicki, Krystian J; O'Neill, Edward J; Pike, Fran J; Hutchison, Marie; Petit-Demoulière, Benoit; Stewart, Michelle E; Gates, Hilary; Wells, Sara; Sanderson, Nicholas D; Teboul, Lydia | PLoS genetics | 38457464 | 2024 Mar |
| Mitochondrial reprogramming by activating OXPHOS via glutamine metabolism in African American patients with bladder cancer. | Kami Reddy, Karthik Reddy; Piyarathna, Danthasinghe Waduge Badrajee; Park, Jun Hyoung; Putluri, Vasanta; Amara, Chandra Sekhar; Kamal, Abu Hena Mostafa; Xu, Jun; Kraushaar, Daniel; Huang, Shixia; Jung, Sung Yun; Eberlin, Livia S; Johnson, Jabril R; Kittles, Rick A; Ballester, Leomar Y; Parsawar, Krishna; Siddiqui, M Minhaj; Gao, Jianjun; Langer Gramer, Adriana; Bollag, Roni J; Terris, Martha K; Lotan, Yair; Creighton, Chad J; Lerner, Seth P; Sreekumar, Arun; Kaipparettu, Benny Abraham; Putluri, Nagireddy | JCI insight | 39253977 | 2024 Sep 10 |
| A single-cell time-lapse of mouse prenatal development from gastrula to birth. | Qiu, Chengxiang; Martin, Beth K; Welsh, Ian C; Daza, Riza M; Le, Truc-Mai; Huang, Xingfan; Nichols, Eva K; Taylor, Megan L; Fulton, Olivia; O'Day, Diana R; Gomes, Anne Roshella; Ilcisin, Saskia; Srivatsan, Sanjay; Deng, Xinxian; Disteche, Christine M; Noble, William Stafford; Hamazaki, Nobuhiko; Moens, Cecilia B; Kimelman, David; Cao, Junyue; Schier, Alexander F; Spielmann, Malte; Murray, Stephen A; Trapnell, Cole; Shendure, Jay | Nature | 38355799 | 2024 Feb |
| A graph theoretical approach to experimental prioritization in genome-scale investigations. | Grady, Stephen K; Peterson, Kevin A; Murray, Stephen A; Baker, Erich J; Langston, Michael A; Chesler, Elissa J | Mammalian genome : official journal of the International Mammalian Genome Society | 39191873 | 2024 Aug 27 |
